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Pathology Grand Rounds, April 30, 2026: Eric Green, MD, PhD

May 01, 2026

Pathology Grand Rounds, April 30, 2026: Eric Green, MD, PhD, presents on, "From the Human Genome Project to the Realization of Genomic Medicine: A Scientific, Medical, and Societal Journey."

ID
14174

Transcript

  • 00:01Welcome to,
  • 00:02Grand Rounds for the Department
  • 00:03of Pathology.
  • 00:04Today, we have a very
  • 00:06unusual speaker,
  • 00:07and then it's it's nearly
  • 00:08a childhood friend of mine,
  • 00:10but not exactly. We didn't
  • 00:11meet until college, And then
  • 00:13we helped each other get
  • 00:14to where we are now.
  • 00:16And he was,
  • 00:18in the undergraduate program with
  • 00:19me at University of Wisconsin,
  • 00:21and we had probably eighty
  • 00:23percent of our classes were
  • 00:24the same. And then and,
  • 00:26then he went off to
  • 00:27do an MD PhD at
  • 00:28WashU when I went off
  • 00:29to Johns Hopkins. And we
  • 00:31kinda kept in touch a
  • 00:32little bit, and then he
  • 00:33did, MD after his MD,
  • 00:35he did laboratory medicine only,
  • 00:37didn't do and I did
  • 00:38AP only. So we're kinda
  • 00:40little contradicting in that way
  • 00:41as well. Yin and yang.
  • 00:43Yeah.
  • 00:44And then,
  • 00:45after that, he became faculty
  • 00:47at WashU for a couple
  • 00:48years, and then he moved
  • 00:49to the NIH, and that's
  • 00:50the story he's gonna tell
  • 00:51you about today along with,
  • 00:54the whole world of genomics,
  • 00:55which Eric is a main
  • 00:56lead major leader in. So
  • 00:58without further ado, we'll bring
  • 01:00Eric up to tell you
  • 01:00the story.
  • 01:06Well, thanks, Dave. It's a
  • 01:08pleasure to be here. I,
  • 01:10I'm I'm I'm always delighted
  • 01:12to see Dave. We we
  • 01:13we catch up with each
  • 01:13other every handful of years,
  • 01:16and,
  • 01:17like you said, we started
  • 01:18to know each other a
  • 01:19lot by sharing a lot
  • 01:20of classes and having a
  • 01:21similar professional journey.
  • 01:23And, it's always great to
  • 01:25see him, but it's also
  • 01:26always, this is, I think,
  • 01:27my second or third time,
  • 01:29coming to to Yale. Actually,
  • 01:31I couldn't I didn't remember
  • 01:32exactly the year, and I
  • 01:33didn't have chance to look
  • 01:34it up. But the last
  • 01:35time I was here was
  • 01:36also for for pathology lecture.
  • 01:37I gave the Don King
  • 01:39lecture, and I think it
  • 01:40was maybe about ten years
  • 01:41ago or twelve years ago,
  • 01:42something like that.
  • 01:43But, it is going to
  • 01:45be an unusual talk. This
  • 01:46is probably I guarantee you
  • 01:47it's not a traditional,
  • 01:49grand rounds.
  • 01:51But I am here to
  • 01:52really tell you about,
  • 01:54a story, a journey, if
  • 01:55you will,
  • 01:56about genomics.
  • 01:58One that you'll see has,
  • 02:00elements that are scientific, some
  • 02:02are medical, some are societal.
  • 02:04It's also completely intertwined with
  • 02:06my, my professional life.
  • 02:08And so I will anecdotally
  • 02:10explain to you how I've
  • 02:11been woven into this, for
  • 02:13now, multiple decades.
  • 02:15The other thing I really
  • 02:16enjoy,
  • 02:17really enjoy about talks like
  • 02:18this, and I'm looking out
  • 02:19of the audience,
  • 02:20is that it's really fun
  • 02:22to tell the story I'm
  • 02:23about to tell you to
  • 02:24heterogeneous audiences. And in particularly
  • 02:26heterogeneous with respect to age,
  • 02:28And I'm not gonna call
  • 02:29anyone out, but I always
  • 02:30like when I can give
  • 02:32talks that include people that
  • 02:33are like Dave's and my
  • 02:34age, and then people that
  • 02:36are somewhat younger. And then
  • 02:37in particular, when I see
  • 02:39young trainees here as well.
  • 02:40Because for some of us,
  • 02:42it's gonna be a walk
  • 02:43down memory lane, and for
  • 02:45others of you, it's gonna
  • 02:46be a history lesson. And
  • 02:48so it is a challenge
  • 02:49to prepare a talk like
  • 02:50this because it means you
  • 02:52really have to have
  • 02:53pieces of your story
  • 02:55that are interesting,
  • 02:57to all members of the
  • 02:58audience.
  • 02:59And, so some people
  • 03:01have told me that my
  • 03:03talks tend to remind them
  • 03:05of, Pixar movies where you
  • 03:07have to have something for
  • 03:09everybody. Otherwise, the parents don't
  • 03:10really wanna watch it and
  • 03:11the kids love it. You
  • 03:11have to have something that
  • 03:12entertains everybody. And so it
  • 03:14really is true. And I
  • 03:15my talk will follow some
  • 03:17very prominent Pixar movies such
  • 03:19as Genome Story,
  • 03:20Finding Genome, and my personal
  • 03:22favorite, genomes dot inc. So
  • 03:24hopefully, I will live up
  • 03:26to this by the end
  • 03:27and hopefully,
  • 03:28you will agree that there's
  • 03:29a little bit of something
  • 03:30for everybody.
  • 03:31The other reason it's getting
  • 03:33even more fun now for
  • 03:34me to tell stories the
  • 03:35way I'm gonna tell the
  • 03:36story is
  • 03:38because I've been able to
  • 03:40exist, not totally by choice,
  • 03:43but mostly by choice,
  • 03:44in really three different and
  • 03:46major major parts of the
  • 03:48biomedical ecosystem.
  • 03:50So as you heard,
  • 03:51after being an undergraduate with
  • 03:53Dave University of Wisconsin, I
  • 03:54went into the MD PhD
  • 03:55program at Washington University.
  • 03:57In nineteen eighty seven, I
  • 03:58graduated. That's my graduation picture.
  • 04:00But that's about the halfway
  • 04:02point of my thirteen years
  • 04:03there. I then trained in
  • 04:04pathology.
  • 04:05By the way, we will
  • 04:06come back to the year
  • 04:07nineteen eighty seven in a
  • 04:08minute. But but when I
  • 04:10graduated
  • 04:11there and I chose to
  • 04:12stay there in part, because
  • 04:13my wife was a medical
  • 04:14student then,
  • 04:15I,
  • 04:16therefore
  • 04:18trained in pathology, which or
  • 04:19lab medicine, which gave me
  • 04:20a chance to go back
  • 04:21to the lab. That was
  • 04:22at a critical juncture because
  • 04:24it was right and especially
  • 04:25at WashU because this new
  • 04:26thing called genomics was pretty
  • 04:28hot at WashU back then,
  • 04:30and that's how I jumped
  • 04:31into genomics as for the
  • 04:32very first time as a
  • 04:33postdoctoral
  • 04:35fellow.
  • 04:35And then I was fortunate
  • 04:36enough to be get involved
  • 04:37in the Human Genome Project
  • 04:38literally on day one. And
  • 04:40even as an assistant professor
  • 04:41for two years, I was
  • 04:42working on the Human Genome
  • 04:43Project. But then an opportunity
  • 04:45came when Francis Collins,
  • 04:47recruited me to the National
  • 04:49Institutes of Health, specifically to
  • 04:51the Genome Institute, now called
  • 04:52the National Human Genome Research
  • 04:54Institute. That was the institute
  • 04:56that was created by the
  • 04:57US Congress to lead the
  • 04:58US's effort in the Human
  • 05:00Genome Project. And I and
  • 05:02and and Francis became the
  • 05:03second director after Jim Watson,
  • 05:05and then he recruited me
  • 05:06there as a junior investigator.
  • 05:08And then over my thirty
  • 05:09one years there, I accumulated
  • 05:11various leadership positions. And then
  • 05:13eventually, when Francis became the
  • 05:15NIH director, I can I
  • 05:17applied to become the Genome
  • 05:18Institute director, which I got?
  • 05:20And then for my last
  • 05:21fifteen years
  • 05:23at NHGRI, I was the
  • 05:24institute director. Last time, I
  • 05:25think, I was here, I
  • 05:26was already the NHGRI director.
  • 05:29I retired from federal service
  • 05:31about thirteen months ago.
  • 05:33It wasn't totally by choice.
  • 05:35I won't go there. But
  • 05:36let's just say I was
  • 05:37retirement eligible, and so I
  • 05:39retired from federal service with
  • 05:41zero intention of retiring.
  • 05:44And, and after looking and
  • 05:46exploring options for this next
  • 05:48stage of my career, I
  • 05:49was very fortunate
  • 05:50that,
  • 05:51eighty seven days ago, and
  • 05:53when I was still counting
  • 05:54days, I went into the
  • 05:55private sector. So I started
  • 05:56in academia,
  • 05:58then the public sector and
  • 05:59the government, and now I'm
  • 06:00in the private sector where
  • 06:01I am the chief medical
  • 06:02officer for a company that
  • 06:03probably many of you have
  • 06:04heard of called Illumina.
  • 06:05And I'm in by eighty
  • 06:07seventh day. So you can
  • 06:08see there's an imbalance of
  • 06:09time across these three domains,
  • 06:11but I've learned a lot
  • 06:12of my first eighty but
  • 06:13I bring a perspective
  • 06:14of someone who's lived in
  • 06:15three places, although only eighty
  • 06:17seven days in the private
  • 06:18sector.
  • 06:19One of the things that's
  • 06:20really cool though about being
  • 06:22at Illumina,
  • 06:23because especially in my thirty
  • 06:24one years in the federal
  • 06:25government is when you're in
  • 06:27the federal government, especially when
  • 06:29you're in a leadership position,
  • 06:30you are overwhelmingly
  • 06:31boring because of ethics rules
  • 06:33that don't allow you to
  • 06:34do anything worth disclosing. But
  • 06:36now at Illumina, I get
  • 06:37to actually use a disclosure
  • 06:39slide, which I've never been
  • 06:40able to do except for
  • 06:41eighty seven days ago. So
  • 06:42I have to disclose this,
  • 06:44and I'm so excited that
  • 06:45I get to add a
  • 06:46slide to my slide deck.
  • 06:47So that's been one of
  • 06:48the fun learning experiences.
  • 06:51So I bring to this
  • 06:52storytelling
  • 06:53talk,
  • 06:54basically, a very broad perspective
  • 06:56of someone who got involved
  • 06:58in genomics at its inception.
  • 06:59But I actually wanna take
  • 07:00a step back and set
  • 07:01a broader context for you.
  • 07:03I'm gonna make the claim
  • 07:04that it's so fun to
  • 07:05talk to a group of
  • 07:06pathologists because you're so much
  • 07:07in the crosshairs of this
  • 07:09revolution or this transition or
  • 07:10this transformation, whatever word you
  • 07:12wanna use. I'm gonna contend
  • 07:14that there are two interrelated
  • 07:15scientific fields,
  • 07:16both launched last century, that
  • 07:18I think are changing medicine
  • 07:19this century.
  • 07:20The first of which is
  • 07:22this field of genetics,
  • 07:23by the way, which didn't
  • 07:25exist as a word until
  • 07:26nineteen o seven, wasn't appearing
  • 07:28the word never appeared in
  • 07:29the scientific press until this
  • 07:31publication
  • 07:32in nineteen o seven. And
  • 07:33of course, genetics is the
  • 07:34study of inheritance.
  • 07:36And the word was invented
  • 07:38before we even know what
  • 07:39the information of inher molecule
  • 07:41of inheritance was, of course,
  • 07:42DNA, but they knew there
  • 07:44was things that were transmitted
  • 07:46through
  • 07:47the inheritance process.
  • 07:49Well, things happened after nineteen
  • 07:51o seven, eventually figured out
  • 07:52that not we. I wasn't
  • 07:53alive. Others figured out that
  • 07:55DNA was the molecule of
  • 07:56heredity. A lot of attention
  • 07:58went to DNA, and at
  • 07:59halftime of last century came
  • 08:01that famous discovery,
  • 08:03of the double helical structure
  • 08:04of DNA,
  • 08:06which gave a key insight
  • 08:08about how it was that
  • 08:09DNA was the information molecule.
  • 08:10And then a lot happened
  • 08:12between the fifties and the
  • 08:13sixties and the seventies and
  • 08:15the eighties that then led
  • 08:17to the coining of a
  • 08:18new word, genomics, genome being
  • 08:21all the DNA of an
  • 08:22organism, and the launching of
  • 08:23a new field of genomics,
  • 08:25which happened in nineteen eighty
  • 08:27seven. And I told you,
  • 08:28that was the year I
  • 08:29graduated
  • 08:30medical school and graduate school,
  • 08:32which means never once as
  • 08:33an MD PhD student did
  • 08:34I hear the word genomics
  • 08:35because it didn't exist until
  • 08:36eighty seven.
  • 08:38And, of course, all of
  • 08:39this was being discussed because
  • 08:41of this idea that the
  • 08:42tools for studying DNA were
  • 08:44getting so so good. And
  • 08:46that's really what made this
  • 08:47progression happen was technological innovation
  • 08:50be between when we discovered
  • 08:52the double helical structure of
  • 08:53DNA that led to the
  • 08:55recognition that we needed a
  • 08:56whole new discipline or at
  • 08:57least the name of a
  • 08:58discipline. And that progression
  • 09:00really does reflect technical innovation.
  • 09:02And it was a series
  • 09:03of important discoveries
  • 09:05such as going from our,
  • 09:08a complete lack of understanding
  • 09:09of how it was that
  • 09:10the four letters of DNA
  • 09:11could encode biological information, actually
  • 09:13figuring out the genetic code,
  • 09:15which took place in the
  • 09:16nineteen sixties.
  • 09:17Of course, then by the
  • 09:18nineteen seventies, when Dave and
  • 09:20I graduated high school, roughly
  • 09:21that time, was when the
  • 09:23first methods for sequencing DNA,
  • 09:24reading out the g's, a's,
  • 09:25t's, and c's were invented.
  • 09:27But then, of course, the
  • 09:28latter seventies and and into
  • 09:30the eighties with the molecular
  • 09:32biology revolution brought all the
  • 09:34tools of molecular biology for
  • 09:35cloning DNA, manipulating DNA, doing
  • 09:37recombinant DNA, eventually inventing PCR
  • 09:40for amplifying DNA and so
  • 09:42forth.
  • 09:43This created an increasingly powerful
  • 09:46tool belt for those who
  • 09:47are interested in studying DNA.
  • 09:49And what that led to
  • 09:51was the idea of could
  • 09:52we, should we, might we
  • 09:54be able to start to
  • 09:55think comprehensively
  • 09:57about organisms' DNA,
  • 09:59all of their genome.
  • 10:01So that led to a
  • 10:02drumbeat of discussions
  • 10:03that ended up leading to
  • 10:05the human genome project. So,
  • 10:07you know, the first as
  • 10:08possible real serious discussion
  • 10:11came about in a very
  • 10:12famous meeting that took place
  • 10:13in nineteen eighty four. It
  • 10:14was called the Alta Summit
  • 10:16where a group of scientists
  • 10:17got together and for the
  • 10:18very first time said, what
  • 10:19might that look like if
  • 10:20we were actually gonna map
  • 10:21and sequence the human genome
  • 10:23and maybe some other genomes?
  • 10:26Then oops. Then nineteen eighty
  • 10:28six,
  • 10:28a prominent,
  • 10:30cancer biologist, Renato Del Beco,
  • 10:32wrote a very pivotal,
  • 10:34editorial perspective
  • 10:36where he talked about the
  • 10:37fact that if we were
  • 10:38ever gonna truly understand cancer,
  • 10:40we needed to sequence the
  • 10:41human genome.
  • 10:42It was that kind of
  • 10:43discussion and drum increasing drum
  • 10:46beats that led to nineteen
  • 10:47eighty seven, the launching of
  • 10:48the field, the coining of
  • 10:49the word, the first journal
  • 10:50called Genomics.
  • 10:52And then scientists got really
  • 10:53serious because then they said,
  • 10:55we really do think we
  • 10:56wanna operationalize this. There were
  • 10:58then two important
  • 11:00studies
  • 11:01that were conducted. One under
  • 11:02the auspices of the National
  • 11:04Research Council, one under the
  • 11:05offices the auspices of the
  • 11:07office of science and technology
  • 11:09policy in the White House,
  • 11:10both of which brought scientists
  • 11:11together and fleshed out the
  • 11:13idea of how we would
  • 11:14go about mapping and sequencing
  • 11:16the human genome, launching a
  • 11:17big project like the Human
  • 11:18Genome Project and so forth.
  • 11:20Of course, that required funders
  • 11:22around the world committing to
  • 11:24actually having the money to
  • 11:25actually do this and then
  • 11:26organize it in some way.
  • 11:28In the United States, the
  • 11:29instrumental hearing took place in
  • 11:31the senate
  • 11:32at at a particular hearing
  • 11:34that took place in nineteen
  • 11:35eighty nine,
  • 11:36presided, including senators like senator
  • 11:39Al Gore and senator Ted
  • 11:41Kennedy, who are big proponents
  • 11:43of genomics and the Human
  • 11:44Genome Project. And they then
  • 11:46authorized that the Human Genome
  • 11:48Project begin, created an entity
  • 11:50at NIH to do it,
  • 11:51and most importantly, wrote a
  • 11:53check to get the Human
  • 11:54Genome Project off the ground
  • 11:56in the subsequent year. Other
  • 11:57funders came in from other
  • 11:58countries and particularly the UK,
  • 12:00and therefore, it was all
  • 12:02teed up to start the
  • 12:03Human Genome Project.
  • 12:05I think that nineteen oh,
  • 12:07you can't quite see it,
  • 12:07but you'll see it in
  • 12:08a second. Nineteen eighty nine,
  • 12:10it'll always be regarded as
  • 12:11a pivotal year where sort
  • 12:13of the world just seemed
  • 12:14to change in nineteen eighty
  • 12:15nine as everything was was
  • 12:17moving towards these incredible things.
  • 12:19So so I will make
  • 12:21the strong argument that the
  • 12:23world changed in eighty nine.
  • 12:25You know, first of all,
  • 12:26we should appreciate that eighty
  • 12:27nine is when Taylor Swift
  • 12:28was born. Okay? So, you
  • 12:29know, you could say whatever
  • 12:30you want, but the world
  • 12:31has never been the same
  • 12:32after that. So appreciate it.
  • 12:34But I also think that
  • 12:35we will look back, especially
  • 12:37as physicians and scientists and
  • 12:38biologists, as eighty nine being
  • 12:40in a pivotal year because
  • 12:42eighty nine was when the
  • 12:43Human Genome Project was about
  • 12:44to be born. And so
  • 12:46there you are, eighty nine,
  • 12:47gonna be blazoned into the
  • 12:49history books for two very
  • 12:50important reasons.
  • 12:52But that, of course, led
  • 12:53to the launching of the
  • 12:54human genome project in nineteen
  • 12:55ninety.
  • 12:57It was really as its
  • 12:58signature goal was about reading
  • 13:00the human blueprint, other genomes
  • 13:01were sweet sequenced smaller organisms,
  • 13:03smaller genomes.
  • 13:04But the signature goal was
  • 13:06to read out for the
  • 13:07very first time the three
  • 13:08billion letters that represents one
  • 13:10copy of the human genome.
  • 13:12And this will forever be
  • 13:14regarded as biology's
  • 13:16most ambitious or at least
  • 13:17its very first incredibly ambitious,
  • 13:20endeavor. Now for those who
  • 13:21don't, especially the younger folks,
  • 13:23don't appreciate, the Human Genome
  • 13:25Project was very unusual.
  • 13:27It was it was not
  • 13:29typical for biologists to do
  • 13:30big organized projects involving thousands
  • 13:32of scientists, multiple countries. It
  • 13:34was not typical to have
  • 13:36it be highly managed.
  • 13:38It had a lot of,
  • 13:40individuals in the scientific community
  • 13:42who were against it, who
  • 13:43didn't believe it was a
  • 13:44good idea. And so there
  • 13:45was just not a simp
  • 13:47a single aspect of the
  • 13:47Human Genome Project that was
  • 13:49conventional.
  • 13:50But despite headwinds, lots of
  • 13:51concerns about whether it'd be
  • 13:53successful, etcetera, etcetera, at the
  • 13:55end of the day, thirteen
  • 13:56years later, the Human Genome
  • 13:57Project was completed and by
  • 13:59any criteria was regarded as
  • 14:01a successful endeavor.
  • 14:03And so what happened, literally
  • 14:05now, I think we're getting
  • 14:07yeah. It's like twenty six
  • 14:08years ago.
  • 14:09And in fact, we're just
  • 14:10over twenty six years ago.
  • 14:11I'm gonna be sorry. Twenty
  • 14:12three years ago, almost exactly
  • 14:14the Genome Project was declared
  • 14:15completed. There were some incredibly
  • 14:17good parties and celebrations that
  • 14:19that took place around that
  • 14:20time. And it's important to
  • 14:23recognize that what the Genome
  • 14:24Project delivered to humanity
  • 14:27was the order of the
  • 14:28roughly three billion letters in
  • 14:29the human genome.
  • 14:31Of course, that just gave
  • 14:32us the ordered letters. It
  • 14:34didn't give us an interpretation.
  • 14:35We knew that was gonna
  • 14:36follow, but at least it
  • 14:37gave us a framework that
  • 14:39everything could then be built
  • 14:40on. And so one important
  • 14:42thing to appreciate about where
  • 14:43we were twenty three years
  • 14:44ago is that we had
  • 14:46just crossed the initial finish
  • 14:48line in the journey of
  • 14:49human genomics, and that will
  • 14:51forever be a historic,
  • 14:53of of historic significance.
  • 14:55However,
  • 14:56as all of you can
  • 14:56appreciate,
  • 14:57that's just when everything began
  • 14:59because that finish line immediately
  • 15:00became a starting line. It's
  • 15:02this classic example that you
  • 15:03finish one thing and you
  • 15:04immediately are gonna start another.
  • 15:06And so a lot happened
  • 15:08when the Genome Project ended.
  • 15:09The different funders had different
  • 15:11reasons for being there. For
  • 15:12example, the other major funder
  • 15:13in the United States was
  • 15:15the Department of Energy. They
  • 15:16had a whole other reason
  • 15:17for wanting to sequence the
  • 15:18human genome. They went off
  • 15:20in a different direction. But
  • 15:21and but and various other
  • 15:22funders around the world, they
  • 15:24did different things in genomics
  • 15:25subsequently. But back at the
  • 15:26National Institutes of Health, as
  • 15:28you might imagine, the focus
  • 15:30was gonna be on human
  • 15:31health, and that's why the
  • 15:32NIH played such a major
  • 15:33role in the Human Genome
  • 15:34Project.
  • 15:36And the reason this became
  • 15:37so important went back to
  • 15:39one of the premises
  • 15:40that was stated in any
  • 15:41of the things written about
  • 15:42that led up to the
  • 15:43Human Genome Project, and that
  • 15:45and which I think was
  • 15:45a very compelling argument, including
  • 15:47to the senators who ultimately
  • 15:49approved this, was that we
  • 15:50can go in and say
  • 15:51that virtually everything that Dave
  • 15:53and I were taught in
  • 15:54medical school was based on
  • 15:56the average patient. But no
  • 15:58patient is average. Every patient
  • 15:59is unique. They bring with
  • 16:00them their unique physical and
  • 16:02social
  • 16:03environments. They also bring a
  • 16:04unique blueprint because every two
  • 16:06people are different unless they're
  • 16:07twins, identical twins. But bottom
  • 16:09line is no patient is
  • 16:11average. Every patient is unique,
  • 16:13and yet we are blind
  • 16:14to the uniqueness in their
  • 16:16DNA, but we don't have
  • 16:17to be if we could
  • 16:18have the ability to query
  • 16:20people's DNA and use information
  • 16:21about their differences
  • 16:23in order to improve the
  • 16:24practice of medicine.
  • 16:26So there we were at
  • 16:27a new starting line, and
  • 16:28it was pretty obvious what
  • 16:29was gonna happen. We were
  • 16:30gonna use genomics in medicine.
  • 16:32So none of us were
  • 16:33surprised that either the popular
  • 16:35press or the scientific press
  • 16:37juxtaposed the two words. Of
  • 16:38course, they're gonna juxtapose the
  • 16:40two words. They're gonna put
  • 16:41the words together and come
  • 16:42up with a phrase like
  • 16:42genomic medicine.
  • 16:44There was only one problem
  • 16:45with twenty three years ago,
  • 16:46is that we could spell
  • 16:47genomic medicine and we could
  • 16:48juxtapose the words, but it
  • 16:49was a very blurry concept.
  • 16:51We really had no idea
  • 16:52what that was gonna look
  • 16:53like nor how we were
  • 16:54gonna actually get there.
  • 16:56Now we appreciated what it
  • 16:58might involve in terms of
  • 17:00from a definitional point of
  • 17:01view, and it was basically
  • 17:03get genomic information about patients
  • 17:05and use that information in
  • 17:06some way to either prevent
  • 17:08disease or to diagnose disease
  • 17:09or maybe even perhaps even
  • 17:11to help treat disease.
  • 17:12So that was where we
  • 17:14were heading,
  • 17:15and we now had to
  • 17:17pivot. So twenty three years
  • 17:18ago, the Genome Institute and
  • 17:20much of the field of
  • 17:21human genomics pivoted. They didn't
  • 17:23abandon. They just pivoted to
  • 17:25include a larger
  • 17:27next journey
  • 17:28that had a new starting
  • 17:29line of the human genome
  • 17:30project and had as its
  • 17:31finish line,
  • 17:32even more audacious,
  • 17:34goal that is realizing genomic
  • 17:36medicine.
  • 17:37And just like the Genome
  • 17:38Project, it was gonna be
  • 17:39a long journey. And just
  • 17:41like the Genome Project, we
  • 17:42didn't know what all the
  • 17:42steps were gonna be, but
  • 17:43we knew what some of
  • 17:44the steps were gonna be.
  • 17:45And just like the Human
  • 17:47Genome Project, it was not
  • 17:48gonna be completed by one
  • 17:50scientist, one institution, one funder,
  • 17:52one country, one discipline, and
  • 17:53it was not gonna be
  • 17:54a sprint. It was gonna
  • 17:55be a marathon.
  • 17:57Lots of different disciplines coming
  • 17:58together, running shoulder to shoulder
  • 18:00for a very long time
  • 18:01and just figuring out what
  • 18:02were the steps that were
  • 18:03gonna be needed, what were
  • 18:04the obstacles, knock them down,
  • 18:06and keep inching your way
  • 18:07closer and closer to get
  • 18:08into the realization of genomic
  • 18:10medicine.
  • 18:11So how do you do
  • 18:12that? Well, I was fortunate
  • 18:14enough to have a front
  • 18:15row seat. I was, at
  • 18:15that point, already in a
  • 18:16leadership position
  • 18:18at NHGRI.
  • 18:20And I was the director
  • 18:21of the intramural program when
  • 18:22the Genome Project ended two
  • 18:24thousand three. Now the Genome
  • 18:26Institute,
  • 18:26just as a representative example
  • 18:28of what had to happen,
  • 18:29they had to pivot, and
  • 18:30they had to develop a
  • 18:31vision to how to get
  • 18:32us to genomic medicine.
  • 18:34Well, the way we did
  • 18:35it, I can tell you,
  • 18:36is that we took sort
  • 18:37of, a routine that we
  • 18:39had developed during the Genome
  • 18:40Project of gathering the scientific
  • 18:42community together and updating the
  • 18:44idea of how you're gonna
  • 18:45accomplish the goals in front
  • 18:46of you. We're shown here
  • 18:47sort of three classic documents
  • 18:49that were published at at
  • 18:51different stages of the Human
  • 18:52Genome Project
  • 18:53that that that basically iterated
  • 18:55and then reiterated how to
  • 18:56complete the Human Genome Project.
  • 18:58And so the day the
  • 18:59Human Genome Project ended, NHGRI
  • 19:01had finished a two year
  • 19:02strategic planning process that laid
  • 19:04out a new blueprint for
  • 19:05what needed to happen in
  • 19:06genomics. And then eight years
  • 19:08later, it was time to
  • 19:09publish a new one. And
  • 19:10and and, and then shortly
  • 19:12nine years later, it was
  • 19:13in during the pandemic,
  • 19:15we published the most recent
  • 19:16one, which the institute is
  • 19:17still going on. These basically
  • 19:19became road maps or blueprints,
  • 19:21whatever metaphor you wanna use,
  • 19:22not only for the institute,
  • 19:24but more broadly for the
  • 19:25community of what were the
  • 19:26steps that we're gonna need
  • 19:27in order to get us
  • 19:28towards,
  • 19:29improving the practice of medicine
  • 19:31through genomics.
  • 19:32And so twenty three years
  • 19:34of progress have been basically,
  • 19:36represented by these three strategic
  • 19:38visions, and I don't have
  • 19:39time to go through all
  • 19:41twenty three years nor do
  • 19:42I have time to go
  • 19:42through all of them. Knowing
  • 19:44I was given a clinical
  • 19:45grand rounds, I thought I
  • 19:47would would just briefly summarize
  • 19:49the more proximal steps so
  • 19:51that I could emphasize the
  • 19:52more clinical ones. And it
  • 19:53but it's not to say
  • 19:54that the more proximal basic
  • 19:55science and translational science is
  • 19:56not important. It's just I
  • 19:58was just trying to figure
  • 19:58out how to best allocate
  • 19:59the time to an audience
  • 20:00like this. So what are
  • 20:02the more proximal accomplishments? What
  • 20:04was the very first step
  • 20:06that needed to be accomplished?
  • 20:07Well, the first step is
  • 20:08probably the most remarkable.
  • 20:10The fact is when we
  • 20:11sequenced the human genome for
  • 20:13the very first time and
  • 20:14finished it twenty three years
  • 20:15ago, it was successful, but
  • 20:17it was expensive. Cost about
  • 20:18a billion dollars to sequence
  • 20:20that first human genome.
  • 20:21Well, I was trained as
  • 20:23a laboratory medicine physician, and
  • 20:24I knew that a billion
  • 20:25dollars was too high of
  • 20:26a price tag for a
  • 20:27clinical test. And I knew
  • 20:29that we needed to lop
  • 20:30off a lot of zeros
  • 20:31to get it down to
  • 20:32something that seemed reasonable, and
  • 20:33the figure we came up
  • 20:34with was a thousand. So
  • 20:36it was in in two
  • 20:37thousand three where the genome
  • 20:38institute said, we need to
  • 20:39figure out how we're gonna
  • 20:40sequence a human genome for
  • 20:41less than a thousand dollars,
  • 20:43and the rest is history.
  • 20:44We've now reduced the cost
  • 20:45of sequencing a human genome
  • 20:46by more than a million
  • 20:47fold. It is less than
  • 20:48a thousand dollars. Companies like
  • 20:50Illumina, where I now work,
  • 20:51were involved with this, but
  • 20:52the Genome Institute was instrumental
  • 20:54in putting out grants that
  • 20:55helped get us there. Other
  • 20:56companies have bought been involved
  • 20:58incredibly
  • 20:59successful.
  • 21:00The fact that in twenty
  • 21:01three years, we were able
  • 21:02to reduce the cost of
  • 21:03saying to make it now
  • 21:03a diagnostic test.
  • 21:06That has allowed us to
  • 21:06go out and not just
  • 21:07be happy with one human
  • 21:09genome sequence. Now we have
  • 21:10millions. In fact, we don't
  • 21:11even know how many millions
  • 21:12we have because there's publicly
  • 21:13available data, and then there's
  • 21:15lots of private data out
  • 21:16there, that that we don't
  • 21:17even know about at at
  • 21:19companies and so forth in
  • 21:20other countries.
  • 21:21And that has given us
  • 21:22a lot of information about
  • 21:23how we differ. We now
  • 21:25have a very precise estimate.
  • 21:26We now know that we
  • 21:27are, you know, ninety
  • 21:29nine point four percent identical
  • 21:32between any two people. And
  • 21:33that sounds incredibly identical, which
  • 21:35it is, but it also
  • 21:36means that there's about three
  • 21:37to five million
  • 21:39spelling differences between any two
  • 21:40of our genomes. And and
  • 21:42buried within those three to
  • 21:43five million different differences in
  • 21:45our spelling are some variants
  • 21:47that are biologically important, some
  • 21:49that are biologically irrelevant, and
  • 21:51then a subset of the
  • 21:52biologically important ones that are
  • 21:53clinically important. And we need
  • 21:55to figure out what all
  • 21:56that means, and we have
  • 21:57incredibly deep catalogs all now
  • 21:59publicly available about all the
  • 22:01places in the human genome
  • 22:02where we know so far
  • 22:03people vary what those variants
  • 22:05are, and the grand challenge
  • 22:07is to figure out which
  • 22:08of those variants are biologically
  • 22:09and medically important.
  • 22:11In order to do that,
  • 22:12you need to know how
  • 22:13a variant changes genome function.
  • 22:15In order to know that,
  • 22:16you need to know how
  • 22:17the genome works. Well, where
  • 22:18are we? Well, we have
  • 22:20profoundly advanced in twenty three
  • 22:22years of studying those three
  • 22:23billion letters
  • 22:24of understanding of how the
  • 22:26genome works. We know a
  • 22:27lot about our twenty thousand
  • 22:28genes, roughly twenty thousand. Although
  • 22:31we still don't know what
  • 22:32the vast majority of those
  • 22:33genes actually do. We now
  • 22:35know there's an incredible complexity
  • 22:37out in the noncoding parts
  • 22:38of the human genome that
  • 22:39choreograph how all these genes
  • 22:41work. We know a lot
  • 22:42about that, but we still
  • 22:43have a long way to
  • 22:44go. In the twenty three
  • 22:45years, we've learned that RNA
  • 22:47is really complicated. Lots of
  • 22:49different kinds of RNAs are
  • 22:50doing lots of things that
  • 22:51we had never any idea
  • 22:52they were actually doing.
  • 22:53So the there's good news
  • 22:55and bad news. The good
  • 22:55news is that we've come
  • 22:57a long way in twenty
  • 22:57three years. The bad news
  • 22:59is we have a still
  • 22:59a long way to go.
  • 23:00And I often will say
  • 23:02that my I'd skip over
  • 23:03my children and grandchildren and
  • 23:05great grandchildren. You'll all still
  • 23:06be interpreting the three billion
  • 23:08letters. This is a multigenerational
  • 23:10challenge,
  • 23:10but we have all the
  • 23:11tools in front of us.
  • 23:12Technologies are coming on board.
  • 23:14We'll get better all the
  • 23:14time. And we have a
  • 23:16we've learned a lot about
  • 23:17genomic variation, genome function, and,
  • 23:20of course, what did that
  • 23:21lead us to? Well, as
  • 23:22as as people interested in
  • 23:23human biology, human health and
  • 23:25disease, it has significantly
  • 23:27advanced our ability to understand
  • 23:28the genomic basis of human
  • 23:30disease.
  • 23:31This has come about most
  • 23:32fruitfully with rare genetic diseases,
  • 23:34which I'm gonna tell you
  • 23:35a little bit more about,
  • 23:36but increasingly we're learning about
  • 23:38the complexity of more common
  • 23:39diseases and where multiple genomic
  • 23:42variants are involved, greater contribution
  • 23:44of the physical and social
  • 23:44environment are involved, and so
  • 23:46forth. But significant
  • 23:48work has been accomplished.
  • 23:50Lots more work has to
  • 23:51be done to fully gain
  • 23:52gain a a full understanding
  • 23:54of the genomic basis of
  • 23:55human disease. But But still,
  • 23:56we're on a good glide
  • 23:57path, and better technologies will
  • 23:59improve it all the time.
  • 24:00What I really wanted to
  • 24:02emphasize, though, which is where
  • 24:03I'm gonna pivot now to,
  • 24:05is the fact that, you
  • 24:06know, even if you go
  • 24:07back sixteen years ago or
  • 24:09something when I first became
  • 24:10the NHGRI director,
  • 24:11we really didn't have examples
  • 24:13of genomic medicine that were
  • 24:15truly being implemented at any
  • 24:16sort of scale, and that
  • 24:18just is not true anymore.
  • 24:20It really has we've really
  • 24:21seen
  • 24:22some vivid examples emerge that
  • 24:24I think is really, really
  • 24:26exciting and I think has
  • 24:27injected a lot of optimism
  • 24:28about what still is left
  • 24:29to come. How has this
  • 24:30come about? Well, it's come
  • 24:31about because of all things
  • 24:32I sort of mentioned. We
  • 24:34can now sequence a patient's
  • 24:35genome for less than a
  • 24:36thousand dollars. We can compare
  • 24:37it to a reference sequence.
  • 24:38We can make a big
  • 24:39list of all the genomic
  • 24:41variants that person has, got
  • 24:42put out a DNA report,
  • 24:44and off we go to
  • 24:44practice genomic medicine.
  • 24:46Now I know there's clinicians
  • 24:48and others in the audience
  • 24:49that know that this is
  • 24:50an oversimplification.
  • 24:51I will admit that. I'll
  • 24:52come back to the slide
  • 24:53later. But
  • 24:55sometimes this works. It does
  • 24:56and and and the sometimes
  • 24:58is enough times to make
  • 25:00it really impressive of predicting
  • 25:01where we're gonna be as
  • 25:02we get better and better
  • 25:03at this. But even this
  • 25:05cursory simple scheme
  • 25:07has allowed us to move
  • 25:08forward and come up with
  • 25:09what I think are at
  • 25:10least five areas where genomic
  • 25:12medicine is here and now.
  • 25:14And so this is sort
  • 25:15of my examples,
  • 25:16and I'm only I'm gonna
  • 25:17dig a little deeper to
  • 25:18some of them than others
  • 25:19because I don't have time
  • 25:20to dig in all of
  • 25:20them, but so I cherry
  • 25:21picked. The first of which
  • 25:23is I'm just gonna give
  • 25:24a shout out to Del
  • 25:25Becco and just say he
  • 25:27was right. He was absolutely
  • 25:28right. I am looking at
  • 25:29the well, I know in
  • 25:30the audience are people that
  • 25:31are far smarter than me
  • 25:32in cancer genomics, so I
  • 25:34won't even talk anymore about
  • 25:35cancer genomics except to say
  • 25:37that
  • 25:38I believe that in the
  • 25:39long run, the greatest area
  • 25:41of impact
  • 25:42across all of medicine
  • 25:44in the long run with
  • 25:45respect to genomics is gonna
  • 25:47be in the cancer realm.
  • 25:47Cancer is a disease of
  • 25:48the genome. I think by
  • 25:49the time we figure this
  • 25:50all out, we're gonna have
  • 25:52incredible stories to tell. We
  • 25:53already have some pretty incredible
  • 25:54stories. I would contend, in
  • 25:55the last twenty three years,
  • 25:57a lot of aspects of
  • 25:58clinic of cancer research, oncology
  • 26:00practice has been greatly influenced
  • 26:02by genomics,
  • 26:03and and and therefore is
  • 26:04why I conclude DelBacco was
  • 26:05simply right. I thought I'd
  • 26:07go a little bit more
  • 26:08into rare genetic disease diagnostics,
  • 26:11because I think there there's
  • 26:12something that maybe people don't
  • 26:13fully appreciate, and I really
  • 26:15wanna make sure you can
  • 26:16see where some of the
  • 26:17early successes have really come.
  • 26:20In order to fully appreciate
  • 26:21it, though, I wanna take
  • 26:22you back in time. So
  • 26:23remember, rare genetic diseases are
  • 26:25diseases
  • 26:26where it's almost always a
  • 26:28single gene that is broken
  • 26:30that leads with a high
  • 26:31likelihood of leading to disease,
  • 26:33you know. And but if
  • 26:34I wanna take and and
  • 26:35it's thought that there's something
  • 26:37like ten thousand,
  • 26:39rare genetic diseases.
  • 26:40By the way, they're individually
  • 26:42rare, but, you know, one
  • 26:44out of ten of us
  • 26:45in this room probably have
  • 26:46a rare genetic disease. So
  • 26:47I don't know what that
  • 26:48number would be. There might
  • 26:49you know, there may be
  • 26:50ten or fifteen of us
  • 26:50in this room who have
  • 26:51a rare genetic disease. There's
  • 26:53thirty million people in America
  • 26:55with a a known,
  • 26:56rare a rare disease, eighty
  • 26:58percent of which are thought
  • 26:59to be genetic, and that
  • 27:00if you do that worldwide,
  • 27:01about three hundred million people
  • 27:02on this earth have a
  • 27:03rare genetic disease.
  • 27:05But let me take you
  • 27:05back in time. The day
  • 27:07the human genome project
  • 27:08started in October of nineteen
  • 27:11ninety,
  • 27:12there were sixty one rare
  • 27:13diseases
  • 27:14for which we knew what
  • 27:15the mutated gene was. Classic
  • 27:17example was sickle cell. Cystic
  • 27:19fibrosis got in by a
  • 27:20year under the wire, just
  • 27:21barely. But sixty one out
  • 27:23of ten thousand.
  • 27:24But now with cheap methods
  • 27:26for sequencing DNA, understanding about
  • 27:28genomic variation, increasing understanding about
  • 27:31the genome function,
  • 27:32and major programs to try
  • 27:34to get at the remaining
  • 27:36tenth of the ten thousand,
  • 27:38we have made tremendous strides.
  • 27:39We're over six thousand. Still
  • 27:41shy of ten thousand, but
  • 27:42we're over six we've gone
  • 27:43from sixty one to six
  • 27:45thousand. And that has just
  • 27:46been unbelievably game changing for
  • 27:48lots of families and game
  • 27:50changing with regard to understanding
  • 27:51the genomic basis of a
  • 27:52lot of rare genetic diseases.
  • 27:54What this means,
  • 27:55it is it is now
  • 27:57routine, and I'm sure it
  • 27:58is taking place here in
  • 27:59pediatrics department in particular where
  • 28:02a patient will come in
  • 28:03with something like a developmental
  • 28:05delay or a cardiac abnormality.
  • 28:07And, yes, they will get
  • 28:08a traditional clinical workup, but
  • 28:10very early on, that clinician
  • 28:11suspects a genetic disease, a
  • 28:13tube of blood goes off,
  • 28:14they will sequence that patient's
  • 28:15genome. It'll cost less than
  • 28:17a thousand dollars. Maybe they'll
  • 28:18even sequence both patient parents'
  • 28:20genomes. They will come out
  • 28:21with a report, and they
  • 28:22will quite frequently come up
  • 28:24with a diagnosis.
  • 28:25All as quick as you
  • 28:26could imagine compared to a
  • 28:28long
  • 28:29Odyssey that typically would be,
  • 28:30seen with those many patients
  • 28:32with rare genetic diseases. What's
  • 28:34the frequency of it? There's
  • 28:35lots of articles I could
  • 28:36point you to. This just
  • 28:37happens to be one that
  • 28:38I will where they talk
  • 28:39about how the yield, at
  • 28:40least in the hands of
  • 28:41the people involved in this,
  • 28:42is about fifty percent.
  • 28:44Just, you know, thirty to
  • 28:45fifty percent.
  • 28:46And and but this never
  • 28:47will increase over time for
  • 28:49lots of reasons,
  • 28:51including the fact that the
  • 28:52better we get at interpreting
  • 28:53the human genome and the
  • 28:54better we get at understanding
  • 28:55how the variance influence genome
  • 28:57function,
  • 28:58we're gonna get better and
  • 28:58better at this. And there's
  • 28:59other reasons to believe we're
  • 29:00only gonna get better and
  • 29:01better at this. And what's
  • 29:03really gratifying, especially for someone
  • 29:04like me who's always worried
  • 29:06about would this get implemented,
  • 29:07would this get implemented,
  • 29:09now we start to see
  • 29:10review articles that talk about
  • 29:12how this is the state
  • 29:13of implementation across dozens and
  • 29:15dozens of studies where genome
  • 29:17sequencing is being used as
  • 29:18a frontline diagnostic tool in
  • 29:20the for working up working
  • 29:22up patients with rare diseases.
  • 29:24And so we are absolutely
  • 29:25seeing this,
  • 29:26play out over and over
  • 29:27again. In fact, it's it's,
  • 29:28you know, thousands and thousands
  • 29:29of times every single month
  • 29:31around the world. Patients with
  • 29:32rare diseases are getting, diagnosed
  • 29:34using genome sequencing as a
  • 29:36frontline tool. There are also
  • 29:38some niche areas that I
  • 29:39wanted to point out. One
  • 29:41is
  • 29:42is in the undiagnosed diseases
  • 29:43space. You you should remember
  • 29:45and I actually don't know,
  • 29:46Dave, if you have this
  • 29:46at at at Hopkins, but
  • 29:48I know we have this
  • 29:49at WashU that you you
  • 29:50there'd be clinics at WashU.
  • 29:52They'd call them Fasanoma clinics
  • 29:54back then. And these and
  • 29:55they definitely had them at
  • 29:56NIH for years where basically,
  • 29:58when there were patients, oftentimes
  • 30:00into adulthood,
  • 30:02where they had gone from
  • 30:03specialist to specialist to specialist,
  • 30:04nobody could figure out what's
  • 30:05wrong with them. They would
  • 30:06bring them to what's called
  • 30:07a fascinoma clinic where they'd
  • 30:09have multiple disciplines come and
  • 30:10take one critical last look.
  • 30:12Can we figure out what's
  • 30:13wrong with this person?
  • 30:14Now under the leadership of
  • 30:16Bill Gall, when he when
  • 30:17I were both, at NHGRI,
  • 30:20and he's shown in the
  • 30:21center, was our clinical director
  • 30:22for many years, Came up
  • 30:23with this idea of undiagnosed
  • 30:24diseases programs
  • 30:26and just called it that
  • 30:27and in particular,
  • 30:28used genomics as a frontline
  • 30:30tool for sort of one
  • 30:31last workup of a patient,
  • 30:32but now using genomics.
  • 30:34And this has now taken
  • 30:35off. We're at an undiagnosed
  • 30:37diseases network across the United
  • 30:38States, and dozens and dozens
  • 30:40of countries have now implemented
  • 30:42undiagnosed diseases programs. They bring
  • 30:44them together, big clinical workup,
  • 30:45genome sequencing,
  • 30:46and this is now becoming
  • 30:48sort of mainstream in a
  • 30:49lot of places,
  • 30:50and really has
  • 30:52importantly
  • 30:53given diagnoses
  • 30:54to many people who for
  • 30:56decades have gone on through
  • 30:57life without knowing diagnosis. In
  • 30:58some cases, it actually has
  • 30:59changed their management. And it's
  • 31:01been very important. It's also
  • 31:02led to discovery of many
  • 31:03new, genetic diseases.
  • 31:06Another niche area is in
  • 31:08the setting of acutely ill
  • 31:09newborns.
  • 31:10In the setting of, of
  • 31:12any given NICU, neonatal intensive
  • 31:14care unit, you will often
  • 31:15have babies
  • 31:17where you have stumped the
  • 31:18neonatologist,
  • 31:19and they simply have no
  • 31:20idea what is going on.
  • 31:21In many cases, they can
  • 31:22predict that the child probably
  • 31:23has a few days before
  • 31:24the they their child will
  • 31:26expire.
  • 31:26Well, through a program that
  • 31:28I helped launch and NHGRI
  • 31:29funded that has now become
  • 31:31sort of now standard in
  • 31:32many places
  • 31:33is the idea when you
  • 31:34have a patient like that
  • 31:35in NICU, don't just get
  • 31:36a genome sequence. Get it
  • 31:37fast. And so technologies and
  • 31:39approaches have been now implemented
  • 31:41to be able to get
  • 31:42a very rapid genome sequence.
  • 31:44And in about thirty to
  • 31:45fifty percent of the time,
  • 31:46you get a diagnosis. And
  • 31:47in many cases, it changes
  • 31:48the management. You get the
  • 31:49kids the patient out of
  • 31:50the NICU into a specialist
  • 31:51care, and it has saved
  • 31:53lives and has resulted in,
  • 31:56a savings of a lot
  • 31:56of money. And, again, what
  • 31:58makes me really happy is
  • 31:59to see the uptake of
  • 32:00this in the NICU
  • 32:02increasingly in the pediatric
  • 32:03the PICU, the pediatric intensive
  • 32:05care unit. And then they
  • 32:07actually do review articles, which
  • 32:08means its uptake is significant
  • 32:10if they can actually study
  • 32:11this. This was a review
  • 32:12article from a couple years
  • 32:13ago. And just read the
  • 32:15first paragraph in particular. They
  • 32:16looked at forty four studies
  • 32:18where this was being done
  • 32:19in ICUs
  • 32:20in with in the pediatric,
  • 32:23area.
  • 32:24And thirty seven percent of
  • 32:25the time, they got a
  • 32:26genetic diagnosis, and twenty six
  • 32:28percent had consequent changes in
  • 32:30management leading to net health
  • 32:31care costs,
  • 32:32reduction or savings.
  • 32:34The point is every one
  • 32:35of these numbers will get
  • 32:36better because we'll get better
  • 32:38at interpreting the data, better
  • 32:39understanding about the genetic basis
  • 32:40of rare diseases and so
  • 32:42forth, which gives great optimism,
  • 32:44exactly why this is now
  • 32:46being implemented more and more
  • 32:47in pediatric intensive care units.
  • 32:50I was particularly impressed at
  • 32:52this paper that I saw,
  • 32:53because I always wonder, well,
  • 32:54what about other intensive care
  • 32:56units? And the people at
  • 32:57Penn also thought about this.
  • 32:59And last summer, they published
  • 33:00this paper, which I thought
  • 33:01is pretty cool, where they
  • 33:02basically said, let's take a
  • 33:04bunch of patients, hundreds of
  • 33:05patients that came into the
  • 33:06adult ICU.
  • 33:08They ruled out they they
  • 33:09excluded from the study those
  • 33:10that were there for trauma
  • 33:11or for poisoning
  • 33:13or for, you know, known
  • 33:14condition like cancer. They were
  • 33:15having, you know, problems related
  • 33:17to their treatment, leaving just
  • 33:19a lot of patients that
  • 33:20all of us know about
  • 33:21that are just they're they're
  • 33:22they're they're just fragile that
  • 33:23they that you're surprised they
  • 33:25have to be in the
  • 33:25ICU, and they just end
  • 33:26up landing in the ICU.
  • 33:28And they're otherwise adult in
  • 33:29some cases, being otherwise healthy
  • 33:31until of a sudden onset
  • 33:32of some symptoms that land
  • 33:33them in the ICU.
  • 33:34And they sequenced their genomes,
  • 33:36and they found that a
  • 33:37quarter of them had an
  • 33:38undiagnosed rare genetic disease.
  • 33:40So, again, that number will
  • 33:42get bigger, but it also
  • 33:43starts pointing to the fact
  • 33:44that many people, including people
  • 33:46who just seem to be
  • 33:47fragile, have rare genetic diseases
  • 33:49that are going on undiagnosed,
  • 33:50and we're in a position
  • 33:51now to increasingly be able
  • 33:52to diagnose them.
  • 33:54So I, you could tell
  • 33:55I'm very enthusiastic about the
  • 33:56progress in this area. And
  • 33:58if you wanna read more,
  • 33:59I would just point you
  • 34:00to to two very short
  • 34:02perspective pieces that came out
  • 34:04just in the last few
  • 34:05weeks, actually,
  • 34:06in two different journals. And
  • 34:07I would just point you
  • 34:08to those because it really,
  • 34:10I think, very nicely underscores
  • 34:11the point that I am
  • 34:12making. And I I just
  • 34:13like the very last paragraph,
  • 34:15what actually, Harry is a
  • 34:17good friend of mine, and
  • 34:17he wrote, I just thought
  • 34:18so eloquently what he just
  • 34:20said. As professional societies codify
  • 34:22universal standards
  • 34:23and laboratories deliver rapid variant
  • 34:26specific insights, clinicians must transition
  • 34:28from reactive
  • 34:29watchful waiting to proactive phenotype
  • 34:32and genotype informed management.
  • 34:35In other words, when you
  • 34:36don't just sit and watch
  • 34:37a patient. Get the damn
  • 34:38genotype. And increasingly,
  • 34:40that's a heck of a
  • 34:40lot cheaper than a lot
  • 34:41of other things you're doing.
  • 34:42And if you had all
  • 34:43of the suspicion of a
  • 34:44rare genetic disease,
  • 34:46you should absolutely be doing
  • 34:47that.
  • 34:48And part of the reason
  • 34:49I wanna point out that
  • 34:51I think it's only gonna
  • 34:52get better is I'm a
  • 34:53genomics guy, so I'm all
  • 34:55enthusiastic about changes in DNA
  • 34:56sequence. But I also realize
  • 34:59biology is more complicated,
  • 35:00and there'll be other technologies
  • 35:02that will deliver other types
  • 35:04of data that will enhance
  • 35:06what we are doing in
  • 35:07genomics.
  • 35:08And one way to think
  • 35:09about it is that, you
  • 35:09know, genomics has just seen
  • 35:11this wave of technology that's
  • 35:12given us insights above the
  • 35:14waterline,
  • 35:15about DNA sequence and DNA
  • 35:17sequence variation.
  • 35:18But there's all these other
  • 35:19things going on, and increasing
  • 35:21the same technologies
  • 35:22can be adapted
  • 35:23to give readouts on transcriptomics
  • 35:25and proteomics
  • 35:27and epigenomic changes and so
  • 35:28on and so forth. And
  • 35:30increasingly and I will have
  • 35:31to change my vocabulary because
  • 35:32I will always say genomics,
  • 35:34but that's gonna almost be
  • 35:35something that's gonna be about
  • 35:37multiomics.
  • 35:38And increasingly,
  • 35:39you're gonna start to see
  • 35:40datasets
  • 35:41that are gonna be delivered
  • 35:42on patients as part of
  • 35:43diagnostic workups for rare genetic
  • 35:45disease. Maybe that accounts for
  • 35:46some of the ones we
  • 35:47can't diagnose. These other modalities
  • 35:49will give us clues. You'll
  • 35:50see this all across research.
  • 35:52You're gonna hear a lot
  • 35:53about data integration represented by
  • 35:55the middle panel, and you're
  • 35:56gonna start to see how
  • 35:57we can extract insights
  • 35:58from the data analysis
  • 36:00of these integrated datasets.
  • 36:02And so
  • 36:03if you just look at
  • 36:05rare genetic diseases,
  • 36:07I it sounds great and
  • 36:08it hypothetical,
  • 36:09but it's actually real. And
  • 36:10it's all once again, I
  • 36:11love when I see review
  • 36:12articles or major articles. Across
  • 36:14the board, you're hearing more
  • 36:16and more publication. You're seeing
  • 36:17more and more publications
  • 36:19talking about the use of
  • 36:20multi omics as part of
  • 36:22rare genetic diseases with respect
  • 36:24to the study of the
  • 36:25diseases and also the diagnostics
  • 36:27associated with working this up.
  • 36:29And so as a result
  • 36:30of this, people are beginning
  • 36:31to prioritize multi omics
  • 36:33beyond just genomics.
  • 36:35In fact, one of the
  • 36:36very last
  • 36:37programs I stood up as
  • 36:38the NHGRI director is a
  • 36:40program that's now in its
  • 36:41third year called Multi Omics
  • 36:43for Health and Disease or
  • 36:44Mode, where it it's exactly
  • 36:46as the name implies, and
  • 36:47it supports this consortium where
  • 36:49they're taking a series of
  • 36:50diseases, and they're using multiple
  • 36:52omics
  • 36:52to see how they can
  • 36:54operationalize
  • 36:54those analyses
  • 36:55to be able to gain
  • 36:56new insights about these about
  • 36:58the those diseases that are
  • 36:59being studied.
  • 37:00And then in my new
  • 37:02hat at Illumina, I can
  • 37:03tell you Illumina is serious
  • 37:04about this. They think there's
  • 37:06more to see, more to
  • 37:07understand, more with multi omics,
  • 37:09and they're not only delivering
  • 37:11platform the same boxes that
  • 37:12are used for sequencing are
  • 37:14now being adapted for getting
  • 37:15methylation data and getting other
  • 37:17types of data, certainly transcriptomic
  • 37:19data, increasingly spatial genomics data,
  • 37:22other types of data, all
  • 37:23with software platforms to help
  • 37:25support the data analysis.
  • 37:26So the public sector supporting
  • 37:28research in this area and
  • 37:30and companies like Illumina supporting
  • 37:32research in this area as
  • 37:33well.
  • 37:35So with respect to genetic
  • 37:36rare genetic diseases, I introduced
  • 37:39you to the idea of
  • 37:39just routine diagnostic workup of
  • 37:42these, of patients.
  • 37:44I mentioned rapid genome sequencing
  • 37:46in the case of of
  • 37:47of newborns. I didn't really
  • 37:49talk much about reproductive
  • 37:50carrier screening, but I could,
  • 37:52and there's certainly a very
  • 37:53interesting area to keep an
  • 37:55eye on. And later in
  • 37:56my talk, I'm gonna come
  • 37:57to the idea of screening
  • 37:58newborns by genome sequencing. But
  • 38:00before I get to
  • 38:01that, there is this important
  • 38:02point in life called birth.
  • 38:05And just before birth has
  • 38:06been one of the most
  • 38:07fertile areas of genomics actually,
  • 38:09fertile area. That's actually sort
  • 38:10of a cute little metaphor.
  • 38:11I've never said that before.
  • 38:12It's a very productive area
  • 38:14because it turns out
  • 38:16that the most used genomic
  • 38:18test today
  • 38:20is noninvasive
  • 38:21prenatal genomic testing. You may
  • 38:23not realize this, but let
  • 38:24me just remind you that
  • 38:26in the old days, meaning
  • 38:27before genomics,
  • 38:28lots of couples, not all
  • 38:29couples, but lot of couples
  • 38:30were interested in getting genomic
  • 38:32information
  • 38:33about their unborn child.
  • 38:35And they would typically,
  • 38:37through an invasive procedure like
  • 38:38what my wife went through
  • 38:39for our two kids, an
  • 38:41amniocentesis, which is unpleasant.
  • 38:43It is expensive, and it's
  • 38:44actually a little dangerous.
  • 38:46But you get out a
  • 38:47carrier type, and you could
  • 38:48look for any employees, like
  • 38:50three copies of chromosome twenty
  • 38:51one. This doesn't have to
  • 38:53be done this way anymore.
  • 38:53In fact, it's not being
  • 38:54done this way anymore routinely.
  • 38:56The frontline diagnostic tool takes
  • 38:58advantage of the fact that
  • 39:01that mothers and fetuses and
  • 39:03the placenta naturally shed DNA
  • 39:05into the bloodstream of a
  • 39:06pregnant individual,
  • 39:07and that DNA can is
  • 39:09cell free DNA, and it
  • 39:10can be analyzed.
  • 39:12And you can analyze it
  • 39:13not through an invasive procedure,
  • 39:14but through a simple blood
  • 39:15draw. Well, pregnant individuals getting
  • 39:17lots of blood draws. Just
  • 39:18one extra tube off it
  • 39:19goes. Actually, most typically to
  • 39:21a company now because companies
  • 39:22have just sprung up to
  • 39:24do this noninvasive
  • 39:25prenatal testing.
  • 39:27Insurance companies are paying for
  • 39:28it. That catalyzed it as
  • 39:29well. And all they're doing
  • 39:31is counting and assigning
  • 39:33read counts to chromosomes. And
  • 39:35if they see an abnormal
  • 39:36ratio, like too many going
  • 39:37to twenty one, it signals
  • 39:39they need a follow-up test
  • 39:40to see if there's an
  • 39:41aneuploidy.
  • 39:42Guess what? It's now the
  • 39:43number one genomic test worldwide.
  • 39:45Eight million pregnant individuals that
  • 39:47is estimated around the world
  • 39:49will get this noninvasive genetic
  • 39:51test done, making it the
  • 39:52number one genomic test. It's
  • 39:53completely
  • 39:54changed how prenatal genetic testing
  • 39:56has been done.
  • 39:58So that's that so fourth
  • 40:00area,
  • 40:01which I'm only gonna mention
  • 40:02but not talk about is
  • 40:03pharmacogenomics,
  • 40:04two big words put together.
  • 40:06But bottom line is people
  • 40:07respond to medications differently. We've
  • 40:09always been perplexed by it,
  • 40:10and we've always done sort
  • 40:11of in a hit and
  • 40:12miss way picking the best
  • 40:14medication. We are increasingly
  • 40:16learning that variants in genes
  • 40:18involved in drug metabolism
  • 40:20are are have a a
  • 40:21large effect on why people
  • 40:23respond to certain medications better
  • 40:25or worse or why they
  • 40:26need their dosage adjusted.
  • 40:27We are learning more and
  • 40:28more about what those variants
  • 40:29are. We're figuring out how
  • 40:31to be able to read
  • 40:31them out efficiently.
  • 40:33It turns out it hasn't
  • 40:34hit as much mainstream because
  • 40:36physicians are difficult to change
  • 40:37their behavior, and they don't
  • 40:39like a test beam between
  • 40:40them and and and the
  • 40:41other patients getting the drug
  • 40:43they want. So there's there's
  • 40:45implementation
  • 40:45issues. There's lots of reasons
  • 40:47I think this will change.
  • 40:47At some institutions, this absolutely
  • 40:49is changing,
  • 40:51partially through the implementation of
  • 40:52clinical decision support tools and
  • 40:54the electronic record and blah
  • 40:55blah blah. There's lots we
  • 40:56could talk about. Needless to
  • 40:57say, this is still an
  • 40:58evolving area. It's been a
  • 41:00little disappointing for some of
  • 41:01us that it hasn't happened
  • 41:02sooner, but trust me. It
  • 41:03has happened in cancer. So
  • 41:05in pharmacogenomics
  • 41:06and cancer has been much
  • 41:07more heavily used than in
  • 41:08in other types of medicine,
  • 41:09but more will come.
  • 41:11I also wanted to immediately
  • 41:13also point out that sometimes
  • 41:14it was, oh, you talk
  • 41:14about medicine. What about prevention?
  • 41:16Is genomics helping there? Absolutely.
  • 41:18Genomics absolutely having to play
  • 41:20a major role in prevention,
  • 41:21but be careful what type
  • 41:23of of of tools you're
  • 41:24talking about and what types
  • 41:26of diseases you're talking about.
  • 41:27There really is a bifurcation
  • 41:29because when it comes to
  • 41:30rare genetic diseases,
  • 41:32prevention,
  • 41:32genomics,
  • 41:33here and now. And it
  • 41:35happens for this gentleman right
  • 41:36here. Maybe he's,
  • 41:38just had a sister who
  • 41:39in her thirties was diagnosed
  • 41:41with, colon cancer. When that
  • 41:43happens,
  • 41:44people will jump in and
  • 41:45immediately say, boy, you know,
  • 41:46you may have something like
  • 41:47Lynch syndrome. We should test
  • 41:48for the known genes that
  • 41:50give to a cancer predisposition
  • 41:51at a young age, and
  • 41:52you should get tested, and
  • 41:53your other siblings should get
  • 41:54tested. Cascade
  • 41:56testing, and boom, all of
  • 41:57a sudden you find out
  • 41:58which members of the family
  • 41:59have the the mutation and
  • 42:01then screen them more proactively,
  • 42:03surveil them more proactively, catch
  • 42:05any cancer earlier. That's absolutely
  • 42:07here and now for b
  • 42:08a c r BRCA one
  • 42:10and breast and ovarian cancer,
  • 42:11for Lynch Syndrome and so
  • 42:12forth. But we also have
  • 42:14prevention for youngsters, and I'm
  • 42:15gonna talk in a bit
  • 42:16about prenatal not prenatal,
  • 42:18newborn screening.
  • 42:20But this little girl may
  • 42:21have been picked up at
  • 42:22a at a very at
  • 42:22birth or shortly after birth
  • 42:24through genetic screening and found
  • 42:26to have a mutation in
  • 42:27a gene that is really
  • 42:28important for how she digest
  • 42:29food, and she would get
  • 42:31have cognitive delay if we
  • 42:32didn't change her diet, but
  • 42:33we could change her diet.
  • 42:34And so there's other increasing
  • 42:36numbers of these circumstances where
  • 42:38simple interventions
  • 42:39truly do prevent disease. And
  • 42:40so prevention and gen in
  • 42:42genomics here and now.
  • 42:44Where it gets a little
  • 42:45tricky and we're at an
  • 42:46awkward phase right now is
  • 42:48when it comes to common
  • 42:50diseases. Because for common diseases,
  • 42:52we don't really have a
  • 42:53lot of examples where we
  • 42:54can point to specific variants.
  • 42:57But rather,
  • 42:58what we have is the
  • 42:59ability to do a flyover
  • 43:01over a person's genome and
  • 43:02collect information about what variants
  • 43:05they have and then correlate
  • 43:07their set of three to
  • 43:08five billion variants
  • 43:09with other people who either
  • 43:11have or don't have a
  • 43:12disease like sudden cardiac death
  • 43:15or hyperlipidemia
  • 43:16or so on and so
  • 43:17forth. And that has led
  • 43:18to the ability to do
  • 43:19distributions
  • 43:20of of risk
  • 43:22based on correlations of people's
  • 43:24set of genomic variance. This
  • 43:25has led to the idea
  • 43:26of a polygenic risk score,
  • 43:28and there's some pretty cool
  • 43:30data out there.
  • 43:31And the problem is it's
  • 43:33still under construction. It's still
  • 43:34under study. It's still not
  • 43:36quite ready for prime time.
  • 43:38And it's something that NIH
  • 43:40is funding in a big
  • 43:41way to try to explore
  • 43:42because it has a lot
  • 43:43of potential to be able
  • 43:44to
  • 43:45find out who's at greatest
  • 43:46risk and maybe able to
  • 43:48do some interventions to try
  • 43:49to dampen that risk. And
  • 43:51so this is one of
  • 43:52these areas where immediately what
  • 43:54happens in a country like
  • 43:55the United States is that
  • 43:57there seems to be some
  • 43:58excitement.
  • 43:59There absolutely is some good
  • 44:01effective examples
  • 44:02seemingly, but we need to
  • 44:03have clinical trials to do
  • 44:04it. But that doesn't stop
  • 44:07companies going to direct to
  • 44:09consumers
  • 44:09and selling things to consumers
  • 44:11that therefore may or may
  • 44:13not be warranted based on
  • 44:14the clinical data. So this
  • 44:15is where I put in
  • 44:16some caution. What's my caution?
  • 44:17Well, any of you could
  • 44:18do this, and I do
  • 44:19this every once in a
  • 44:20while. Just start doing Google
  • 44:21searches for polygenic risk scores,
  • 44:23and you see lovely websites
  • 44:24that are completely convincing that,
  • 44:26yeah, maybe I should get
  • 44:27that test and maybe the
  • 44:28doctor doesn't wanna order it.
  • 44:29I'll just get it myself
  • 44:30and see what I'm at
  • 44:31risk for. And that seems
  • 44:32so good, and at first
  • 44:33you say, oh, yeah, that's
  • 44:34really good for two hundred
  • 44:35and fifty nine dollars. But
  • 44:36then you realize, it's just
  • 44:38like Amazon. When you click
  • 44:39there, they say, if you
  • 44:41want that, maybe you also
  • 44:42wanna get tested for other
  • 44:44things, like whether you have
  • 44:45your healthy weight or your
  • 44:47nutrition or your personality type
  • 44:48or your etcetera etcetera.
  • 44:51Or here's another one. Looks
  • 44:53great. Certainly very innocent until
  • 44:55you see what else they're
  • 44:56offering including
  • 44:57finding your superpowers through DNA
  • 44:59and perfecting your skin.
  • 45:01This risks undermining the whole
  • 45:04endeavor which is what makes
  • 45:05me nervous. I think there's
  • 45:06one more. Yeah. This I
  • 45:07like. They even have a
  • 45:08good metaphor to explain single
  • 45:10gene disorders and polygenic risk.
  • 45:11I love it. They're teaching.
  • 45:13And then but you click
  • 45:14through and you find out
  • 45:15that they're talking about all
  • 45:16sorts of crazy things, including
  • 45:18DNA mindfulness. I don't even
  • 45:20know what the hell that
  • 45:21means.
  • 45:22This risks undermining the enterprise
  • 45:24completely, and I don't want
  • 45:26that to happen by people
  • 45:27clicking all this. And then
  • 45:28eventually, when their clinician talks
  • 45:29to them, they're gonna say,
  • 45:30I didn't learn any mindfulness
  • 45:32from the test. Forget this.
  • 45:33I don't want my polygenic
  • 45:34risk assessed.
  • 45:36However, there is some optimism
  • 45:38is that if we could
  • 45:39just try to dampen out
  • 45:40that that commercial noise
  • 45:43that when you start to
  • 45:44see a place that you
  • 45:45actually could trust, and then
  • 45:46you could start to build
  • 45:47on that with some could
  • 45:48very cautiously,
  • 45:50then maybe we'll see this
  • 45:51come to be. And I
  • 45:52I Broad the Broad Clinical
  • 45:53Labs, I have great respect
  • 45:54for the people there. And
  • 45:55very recently, they launched a
  • 45:57test that they are now
  • 45:58selling, for polygenic respites just
  • 46:00for eight cardiovascular
  • 46:01conditions.
  • 46:02And as a result, we're
  • 46:04starting to see people stick
  • 46:05their toe in the water
  • 46:06just around this domain. They
  • 46:07said a lot of people
  • 46:08are starting to order this.
  • 46:09And then I thought this
  • 46:10was pretty cool, and it's
  • 46:11what we've been waiting for.
  • 46:13And I think it signals
  • 46:14a first step towards progress.
  • 46:15In breaking news, very recently,
  • 46:18the American College of Cardiology
  • 46:20and the American Heart Association,
  • 46:21who periodically put out the
  • 46:24the the clinical guidelines,
  • 46:26for working up patients with
  • 46:28hyperlipidemia,
  • 46:29put one out last month,
  • 46:30and here's the paper,
  • 46:32that where it's described. And
  • 46:33it's very detailed if any
  • 46:35of you have looked at
  • 46:36this and lots and lots
  • 46:36of things. But if you
  • 46:38dig a little deeper into
  • 46:39that paper, there is this
  • 46:40table here where they actually
  • 46:42start to talk about,
  • 46:44I mean, high polygenic risk.
  • 46:46And what I thought was
  • 46:47even more exciting, and it
  • 46:48was it's really a light
  • 46:49touch. It's just you may
  • 46:50wanna think about it and
  • 46:51they gave some examples. It
  • 46:52really wasn't a heavy guideline.
  • 46:54But more importantly in my
  • 46:55mind is they had a
  • 46:56paragraph in the text where
  • 46:58they actually talked about polygenic
  • 47:00risk scores, which is the
  • 47:01first step towards educating busy
  • 47:03practicing physicians that in practice
  • 47:05guidelines, we're gonna start to
  • 47:06hear about polygenic risk.
  • 47:08So I'm not overstating this
  • 47:10as being the end all.
  • 47:11I'm just saying it's the
  • 47:12beginning of what I think
  • 47:13is a very important progression
  • 47:15as maybe we're gonna start
  • 47:16to see the idea polygenic
  • 47:18risk,
  • 47:19come into clinical guidelines increasingly
  • 47:21across different medical disciplines.
  • 47:24So what I've told you
  • 47:26about so far is what's
  • 47:28going on in the last
  • 47:28twenty three years with this
  • 47:30vaguest idea of what genomic
  • 47:31medicine was gonna be,
  • 47:34to now actually bringing clarity.
  • 47:36We don't have a comprehensive
  • 47:37list. If you invite me
  • 47:38back here ten years from
  • 47:39now, I'm sure we'll have
  • 47:40a bigger list. But at
  • 47:41least for some of the
  • 47:42early examples, it is in
  • 47:44focus. We know what we
  • 47:45are doing. And we we've
  • 47:46we're learning so much from
  • 47:48these earliest examples, good, bad,
  • 47:49and other.
  • 47:50That does lead to a
  • 47:52question that I am frequently
  • 47:53asked, and so I will
  • 47:55just, right now, put it
  • 47:56as part of my talk.
  • 47:57What do I think is
  • 47:58the next big thing in
  • 47:59genomic medicine?
  • 48:01And my views on this
  • 48:02have actually changed over the
  • 48:03last year, year and a
  • 48:04half. And I would say
  • 48:06that my number one answer
  • 48:07now is that it's a
  • 48:08seismic expansion of an established
  • 48:10thing. What do I mean
  • 48:11by that? Well, let me
  • 48:12remind you, and I hinted
  • 48:13at it earlier,
  • 48:14is if we go back
  • 48:15sixty years, there is a
  • 48:17very rich history starting here
  • 48:18in the US, but now
  • 48:19around the world of prenatal
  • 48:21genetic screening. And it started
  • 48:23in the sixties, but it's
  • 48:24progressed throughout. For those of
  • 48:25you who don't know the
  • 48:26details,
  • 48:27just let me just remind
  • 48:28you that at about day
  • 48:29one or two in every
  • 48:31state in the United States,
  • 48:33a mean nurse comes into
  • 48:35the nursery
  • 48:36and nicely cleans off the
  • 48:38heel of an of a
  • 48:39newly born, infant
  • 48:41and and sticks it with
  • 48:43a little needle and then
  • 48:44gets a little wipe there
  • 48:45and then takes a drop
  • 48:47several drops of blood and
  • 48:49puts it on a piece
  • 48:50of filter paper called a
  • 48:51Guthrie card that gets sent
  • 48:53off to the state lab
  • 48:54in the United States. It's
  • 48:55done state by state in
  • 48:56the public health lab where
  • 48:58they are screened for anywhere
  • 49:00between forty and sixty
  • 49:02rare genetic diseases, single gene
  • 49:04disorders. Usually, I try to
  • 49:05I does anybody know what
  • 49:06Connecticut is? Usually, when I
  • 49:07come somewhere, I always try
  • 49:08to look up. Does anybody
  • 49:09know what every state has
  • 49:11a different number. I don't
  • 49:12know if Connecticut's more like
  • 49:13seventy or Connecticut's more like
  • 49:15sixty or fifty. But in
  • 49:16any case, it's somewhere in
  • 49:17that range.
  • 49:17And, of course, now you're
  • 49:19thinking you're screening for fifty
  • 49:20or sixty, but we know
  • 49:21about six thousand. You could
  • 49:22see that the mismatch is.
  • 49:24So the idea is, why
  • 49:25are we just doing sixty?
  • 49:26Why don't we just do
  • 49:26them all? Well, I can
  • 49:28tell you that there always
  • 49:29was early talk about just
  • 49:31sequencing every newborn.
  • 49:32And in fact, I can
  • 49:33tell you that when the
  • 49:34Genome Project in fact, I
  • 49:35actually think of the congressional
  • 49:36hearings in eighty nine. They
  • 49:38talked about the ideas that
  • 49:39if we could learn how
  • 49:39to sequence the human genome,
  • 49:41maybe one day, maybe one
  • 49:43day, we would sequence every
  • 49:45baby's genome at birth and
  • 49:46we would make it part
  • 49:47of their electronic record. It
  • 49:49was very funny to say
  • 49:50that back in nineteen ninety
  • 49:51when the Human Genome Project
  • 49:52began because Dave and I
  • 49:54remember that back in nineteen
  • 49:55ninety, the electronic record was
  • 49:56all done handwritten
  • 49:58paper was not electronic.
  • 49:59The the the idea of
  • 50:00sequencing a genome and having
  • 50:01the genome sequence be carried
  • 50:03forward with a patient for
  • 50:04their life before electronic records
  • 50:06was a bit of a
  • 50:07joke. But by the time
  • 50:08the Genome Project ended, it
  • 50:09started to get serious attention
  • 50:11with electronic health records, it
  • 50:12became quite viable. And we
  • 50:14already have the infrastructure for
  • 50:15doing it. And so it's
  • 50:16beginning to get a lot
  • 50:17of attention right now.
  • 50:19And I'm not the only
  • 50:21one thinking it's getting a
  • 50:22lot of attention. You know,
  • 50:23even the popular press has
  • 50:24thought about this idea.
  • 50:26Time magazine got really audacious
  • 50:28about twelve years ago. They
  • 50:29had one of their futuristic
  • 50:30issues where they talked about
  • 50:32a series of domains, what
  • 50:33was gonna happen in the
  • 50:34future. And they made a
  • 50:35claim in twenty fourteen
  • 50:37that by twenty twenty five,
  • 50:39which meant last year, everyone
  • 50:41would get their DNA mapped.
  • 50:42I wish I could have
  • 50:43edited that. I would have
  • 50:44said sequenced
  • 50:45at birth.
  • 50:46We didn't make that. Okay?
  • 50:48But I like their audacity
  • 50:49that they thought that was
  • 50:50happening. But maybe they were
  • 50:51off by some number of
  • 50:52years because things are really
  • 50:54starting to heat up now
  • 50:56in this arena. And there
  • 50:57is a lot of activity
  • 50:58and a lot of research
  • 50:59going on. And all you
  • 51:01have to do is is
  • 51:02and that's why I put
  • 51:03it on my watch list
  • 51:04of what I think is
  • 51:04happening. There is just so
  • 51:06many publications coming out where
  • 51:08they are doing pilots
  • 51:09all around the world of
  • 51:11sequencing healthy newborns, not this
  • 51:13the ill ones, the healthy
  • 51:14ones, seeing what they could
  • 51:15learn, seeing how you could
  • 51:16operational, dealing with all the
  • 51:17logistics.
  • 51:18In fact, there are so
  • 51:19many worldwide studies going on
  • 51:22that a few years ago
  • 51:23an international organization called ICONS,
  • 51:26International Consortium of Newborn Sequencing
  • 51:28got established, and every one
  • 51:29of those little black dots
  • 51:30are where a major study
  • 51:31is going on of of
  • 51:33of of healthy newborn sequencing.
  • 51:35Some of the most prominent
  • 51:36of these, there's multiple prominent
  • 51:38ones, but you may have
  • 51:39heard of the generation study
  • 51:40in the UK or the
  • 51:41guardian study here in the
  • 51:43United States.
  • 51:44The generation study in the
  • 51:45UK has so far along
  • 51:47and they're so excited about
  • 51:48it that last year,
  • 51:51the UK declared that by
  • 51:53twenty thirty five, they're gonna
  • 51:54sequence every baby born in
  • 51:56the UK. And other countries
  • 51:57are now starting to talk
  • 51:58in a similar way. So
  • 51:59they've really put down the
  • 52:01marker. And as a result
  • 52:02of that, even here in
  • 52:03the United States,
  • 52:05more attention is being spent.
  • 52:07And the project that I
  • 52:08tweaked a little before I
  • 52:09left and finally,
  • 52:11it got launched after I
  • 52:12left NIH. It's a brand
  • 52:13oh, I'm sorry. Before I
  • 52:14get to that one, other
  • 52:15breaking stories. Thailand has a
  • 52:16major program. Denmark has a
  • 52:18major program of newborn sequencing.
  • 52:20But then I was telling
  • 52:21you about the program that
  • 52:22just got launched earlier this
  • 52:24year at NIH called the
  • 52:25Beacon study, where they are
  • 52:28specifically working with the state
  • 52:29health labs to try to
  • 52:31move forward at making that
  • 52:33transition from forty to fifty,
  • 52:35diseases to be screened for.
  • 52:36But what would it look
  • 52:37like if a state lab
  • 52:38started to do genome sequencing?
  • 52:40So a big consortium funded
  • 52:41by the NIH.
  • 52:42Oh, and then there's politics
  • 52:44getting involved in it. In
  • 52:46fact, if if any of
  • 52:47you said, what is the
  • 52:48most progressive state when it
  • 52:50comes to committing to genome
  • 52:52sequencing of newborns,
  • 52:54you would never think that
  • 52:56I would say the word
  • 52:57Florida.
  • 52:58But it turns out that
  • 52:59it's Florida. Why? Because one
  • 53:02member of the state legislature
  • 53:04had a child who died
  • 53:05of Tay Sachs disease. His
  • 53:07name is Adam Anderson. You
  • 53:08can read about him or
  • 53:08see interviews in the news.
  • 53:10He they died he was
  • 53:11not Ashkenazi Jewish nor was
  • 53:13his wife. And the child
  • 53:14died
  • 53:15of Tay Sachs disease at
  • 53:17age four, and they went
  • 53:18under a three year diagnostic
  • 53:20odyssey missing every opportunity to
  • 53:22enroll in clinical trials because
  • 53:23you had to be much
  • 53:24younger to be in a
  • 53:25clinical trial for Tay Sachs.
  • 53:26And he just said, why
  • 53:27are parents not being given
  • 53:28the ability to sequence their
  • 53:30patient their child's genome at
  • 53:31birth? We should figure out
  • 53:32a way to do this
  • 53:33and at least give them
  • 53:34the option. They got passed
  • 53:35in Florida, the Florida Genetic
  • 53:37Sunshine Act,
  • 53:38passed in Florida by a
  • 53:40unanimous vote of the state
  • 53:41legislature, signed into law by
  • 53:43by governor DeSantis and is
  • 53:45the most progressive ambition. They
  • 53:47haven't committed fully, but they
  • 53:48are now doing a pilot.
  • 53:49It's the most ambitious pilot
  • 53:51of any given state. So
  • 53:52Florida's leading kind of embarrasses
  • 53:54Connecticut as far as I'm
  • 53:55concerned, but I say that
  • 53:56every state I visit.
  • 53:58There's a lot of momentum
  • 53:59in this arena,
  • 54:01and I I I'd also
  • 54:02just like to share a
  • 54:03clip. So there's another green
  • 54:05in the genomics world called
  • 54:06Robert Green. We're not related.
  • 54:08We we we,
  • 54:09he he I just like
  • 54:10a lot of the things
  • 54:11he says and how he
  • 54:11says it. He is the
  • 54:12leader of the beacons program
  • 54:14that I just told you
  • 54:15about, and I just like
  • 54:16how he brings us into
  • 54:17the future in this TED
  • 54:18Talk. If you wanna listen
  • 54:19to the whole thing, it's
  • 54:20fifteen minutes. I'm just gonna
  • 54:21show you a one minute
  • 54:22clip. But if we really
  • 54:23want to invent the future,
  • 54:24we've gotta do something different.
  • 54:26We really want to invent
  • 54:27the future, we've gotta realize
  • 54:29that a child's DNA
  • 54:31doesn't change over time,
  • 54:34but the science
  • 54:35is changing all the time.
  • 54:37And so what that means
  • 54:38is we should sequence your
  • 54:40child's DNA, and we should
  • 54:42revisit and reanalyze
  • 54:43that DNA
  • 54:45over and over again to
  • 54:47truly
  • 54:48create the dream of genome
  • 54:50informed medicine.
  • 54:52Because each and every year,
  • 54:54there will be new insights
  • 54:56and new treatments available.
  • 54:59Well, this isn't offered anywhere
  • 55:01in the world,
  • 55:02but I'm happy to tell
  • 55:03you that we are trying
  • 55:05to build this.
  • 55:06We are building
  • 55:08an AI enhanced
  • 55:10digital health platform
  • 55:12so that you, your grandchildren,
  • 55:14your children, your pediatricians,
  • 55:17your health care centers,
  • 55:19your employers,
  • 55:20your nations
  • 55:22can do this at scale.
  • 55:24It's gonna take a certain
  • 55:25amount of courage to change
  • 55:27the way we think about
  • 55:28disease,
  • 55:29to embrace
  • 55:30the knowledge
  • 55:31of risk
  • 55:33in order
  • 55:34to preserve our health rather
  • 55:36than waiting for us and
  • 55:37our children to get sick
  • 55:39and treating them there. But
  • 55:41if we can do this,
  • 55:43if we can embrace this,
  • 55:45we can save millions of
  • 55:46lives and usher in an
  • 55:48entirely
  • 55:49new era
  • 55:50of genome inspired medicine.
  • 55:52Thank you.
  • 55:54So I I like especially
  • 55:55how he talks about being
  • 55:56courageous. I also think it
  • 55:57just I think we're gonna
  • 55:58start taking this as a
  • 55:59very practical way. You know,
  • 56:01I'm I'm on airplanes a
  • 56:02lot these days for Illumina,
  • 56:04and I was I suddenly
  • 56:05realized that I would not
  • 56:06wanna get on any airplane
  • 56:08if the mechanic taking care
  • 56:09of that plane and doing
  • 56:11service on a plane didn't
  • 56:12have a blueprint in front
  • 56:13of them. And I just
  • 56:14wonder if part of what
  • 56:15we're all thinking about in
  • 56:17genomics
  • 56:18is that are we heading
  • 56:19towards a future where you're
  • 56:20this is how Adam Anderson
  • 56:21feels. In the future, they're
  • 56:23just not gonna want a
  • 56:23doctor taking care of you
  • 56:25or your child without having
  • 56:26a genome sequence in front
  • 56:27of them when we get
  • 56:28to the point of operationalizing
  • 56:30all that information.
  • 56:31So I I think our
  • 56:32minds might change over time
  • 56:33in a way that will
  • 56:34make this very comfortable. However,
  • 56:36I'm not saying any of
  • 56:38this is easy because the
  • 56:39what I'm talking about in
  • 56:40the future is a circumstance
  • 56:42like this where every child
  • 56:43walking into a hospital or
  • 56:44clinical have their genome sequence
  • 56:45in hand. But everybody's happy
  • 56:47here. If we don't do
  • 56:48this well, if we don't
  • 56:49figure out how to implement
  • 56:50this, which is why we're
  • 56:51doing all of these studies,
  • 56:53is to figure out the
  • 56:53logistics and the ethics and
  • 56:55the and and all the
  • 56:56social dimensions.
  • 56:58If we screw this up,
  • 56:59this is what it'll be
  • 57:00like, where we'll give them
  • 57:01a tsunami of information, and
  • 57:02we'll terrify the family, we'll
  • 57:04terrify the patients, and we'll
  • 57:05terrify the clinicians.
  • 57:06We can't let that happen,
  • 57:08but I can tell you
  • 57:09there's a lot of attention
  • 57:10being given to the bioethical
  • 57:11issues associated with newborn sequencing,
  • 57:13and that's the reason why
  • 57:14these studies and these consortiums
  • 57:16have formed.
  • 57:18So let me just point
  • 57:19out that we're celebrating the
  • 57:20arrival of genomic medicine, and
  • 57:22we have a lot of
  • 57:23reason to celebrate.
  • 57:25But nothing about what I've
  • 57:27described to you has been
  • 57:28linear. It's really complicated.
  • 57:30Lots of twists and turns,
  • 57:31and we've all along the
  • 57:32way faced lots of challenges.
  • 57:34And so I just wanna
  • 57:34spend two minutes
  • 57:36reminding you that I am
  • 57:38well aware of the fact
  • 57:39that my enthusiasm is also
  • 57:41met with a recognition
  • 57:42that we have huge challenges
  • 57:44ahead, and I could have
  • 57:44spent an hour talking about
  • 57:45the challenges. I will just
  • 57:47briefly point out two major
  • 57:48challenges
  • 57:49that I oversimplified
  • 57:51what it's like to actually
  • 57:52analyze
  • 57:53a a a patient's genome.
  • 57:55I fully get that this
  • 57:56was profoundly an oversimplification.
  • 57:58I completely acknowledge that we
  • 58:00could sequence any patient at
  • 58:01Yale Hospital. We could read
  • 58:03out their their sequence and
  • 58:05get their three to five
  • 58:06million variants. But when we
  • 58:07go to round on them
  • 58:08the next day, most of
  • 58:10those list of variants will
  • 58:11have no idea what they
  • 58:12mean. And we really just
  • 58:14skim the cream to be
  • 58:15able to come up with
  • 58:16any real diagnosis.
  • 58:17But we're doing it pretty
  • 58:18effectively so far. We'll get
  • 58:19better at it, but we
  • 58:20got a long way to
  • 58:21go in this simple step.
  • 58:23That's the scientific challenge. We
  • 58:25also face societal challenges.
  • 58:28Why are there societal challenges?
  • 58:29Because genomics is now relevant
  • 58:31in society.
  • 58:32It wasn't always the case.
  • 58:34I can tell you that
  • 58:35when the Genome Project began
  • 58:37and all the geekies people
  • 58:39like me that were mapping
  • 58:40and sequenced in the human
  • 58:41genome, we would get together.
  • 58:42We would feel like kids
  • 58:44at a holiday,
  • 58:45gathering of a family at
  • 58:47the kids' table. Right? Kids'
  • 58:48table, I don't know about
  • 58:49your families, but we had
  • 58:50kids' table. That's where all
  • 58:51the fun was. But, you
  • 58:52know, you didn't have any
  • 58:53worries. Right? Because we were
  • 58:54a bunch of kids. We
  • 58:55were just a bunch of
  • 58:55people mapping and sequencing. You
  • 58:56know, people weren't paying attention.
  • 58:58Society wasn't paying attention.
  • 58:59But we've made that transition
  • 59:01now because now, no, Eric.
  • 59:03You can't sit at the
  • 59:04kids' table. I don't care
  • 59:05that they're talking about iPhones,
  • 59:06Instagram, and Taylor Swift. You
  • 59:08have to stay here and
  • 59:09talk about mortgages,
  • 59:11life insurance, taxes, politics,
  • 59:13and genomic medicine and health
  • 59:15care.
  • 59:16This is because we've touched
  • 59:18health care.
  • 59:19What is a more complicated
  • 59:20issue on set of circumstances
  • 59:22than health care for any
  • 59:23society in any part of
  • 59:25the world? And as a
  • 59:26result, we now have adult
  • 59:27problems.
  • 59:28Because now
  • 59:29we have to face all
  • 59:30the societal challenges associated with
  • 59:32health care now just with
  • 59:33a genomic lens. How does
  • 59:34it get paid for? How
  • 59:35does it get delivered? How
  • 59:37exactly do we regulate it?
  • 59:38How exactly do we ensure
  • 59:40equity? How exactly do we
  • 59:41ensure privacy? Oh, and by
  • 59:43the way, we got a
  • 59:44lot of literacy issues, both
  • 59:45for patients and health care
  • 59:46professionals alike.
  • 59:48And so these are all
  • 59:49things we are embracing as
  • 59:50well. And we as a
  • 59:52ecosystem of professionals, whether it's
  • 59:53the private sector, whether it's
  • 59:55government, whether it's academia, have
  • 59:57to own up and help
  • 59:58address all these societal issues,
  • 01:00:00not to mention many, many
  • 01:00:01other issues that I didn't
  • 01:00:02even have time to talk
  • 01:00:03about.
  • 01:00:04So with that, let me
  • 01:00:06just close by just saying
  • 01:00:07that what I've told you
  • 01:00:09about,
  • 01:00:10through a walk down memory
  • 01:00:11lane or a history lesson
  • 01:00:12alike is how we went
  • 01:00:14from the most basic information
  • 01:00:15about DNA's structure.
  • 01:00:17We put a magnifying glass
  • 01:00:19on it during the Human
  • 01:00:20Genome Project,
  • 01:00:21read out the sequence, and
  • 01:00:23then use threads of genomics
  • 01:00:25to increasingly
  • 01:00:26create a tapestry that affected
  • 01:00:28basic science
  • 01:00:29and affected translational science, increasingly
  • 01:00:32clinical research. And now as
  • 01:00:34we, including people here, are
  • 01:00:36helping to continue to to
  • 01:00:37put stitch together this growing
  • 01:00:39tapestry of genomics being used
  • 01:00:41in medicine. And so with
  • 01:00:43that, I will stop, and
  • 01:00:44I'm happy to take any
  • 01:00:45questions. Thank you.
  • 01:00:55Thank you, Eric. Sure. Does
  • 01:00:56anyone have any questions? And
  • 01:00:58I realized my excitement, I
  • 01:00:59went a little longer than
  • 01:01:00I thought. So people have
  • 01:01:01to go off to do
  • 01:01:02important things, that's fine. But
  • 01:01:03I'm also happy to stay
  • 01:01:04here for questions.
  • 01:01:06Over here? That's yeah. The
  • 01:01:08back. Yeah.
  • 01:01:09Look. With all this golden
  • 01:01:11element data Yeah. You know,
  • 01:01:12potentially, are soon being available
  • 01:01:14up to the patients,
  • 01:01:15and
  • 01:01:17the interpretability
  • 01:01:18being hard, requiring complicated things
  • 01:01:20happening in the cloud or,
  • 01:01:21like, you know, reference need
  • 01:01:22to Yeah. Databases and that
  • 01:01:24all being boiled down into
  • 01:01:25a report. It's available to
  • 01:01:27the clinician directly.
  • 01:01:28It is often interpreted
  • 01:01:31as a sort of output
  • 01:01:32of black box.
  • 01:01:34Where do you see the
  • 01:01:35role of individual pathologists
  • 01:01:38in this process? You know,
  • 01:01:39how do they factor into
  • 01:01:41that model of patient care?
  • 01:01:43Yeah. I you know, you
  • 01:01:44gotta get to the table.
  • 01:01:45Right? I mean, there's just
  • 01:01:46an expression that I've often
  • 01:01:47heard, you know, if you're
  • 01:01:48not on the table, you're
  • 01:01:49at the you're, you know,
  • 01:01:50you're not at the table,
  • 01:01:51you're on the menu.
  • 01:01:52And, you know, so I
  • 01:01:53mean, there's a lot I
  • 01:01:54mean, I I would love
  • 01:01:56to see more pathologists involved
  • 01:01:58in a lot of these
  • 01:01:58these,
  • 01:01:59working groups and a lot
  • 01:02:00of these public private partnerships,
  • 01:02:02a lot of these consortium
  • 01:02:03because they're they they know
  • 01:02:05what this is like to
  • 01:02:06deliver diagnostic information.
  • 01:02:08And I think the there's
  • 01:02:09would be a new world
  • 01:02:10here, and, we need that
  • 01:02:12expertise,
  • 01:02:13at at in in all
  • 01:02:15of these arenas.
  • 01:02:18Yeah. What's, when you choose
  • 01:02:20the image of human, which
  • 01:02:21human? And in the research,
  • 01:02:23you know, which we which
  • 01:02:25Yeah. So I didn't cut
  • 01:02:25so it's a great question.
  • 01:02:26I mean, let's let's the
  • 01:02:28the I won't tell you
  • 01:02:29the story about so the
  • 01:02:30first thing is the Human
  • 01:02:31Genome Project produced a tapestry.
  • 01:02:33It was it was it
  • 01:02:34was a bunch of people.
  • 01:02:35It was mostly one of,
  • 01:02:36like, little almost half was
  • 01:02:38one person for complicated reasons,
  • 01:02:39but but it was a
  • 01:02:40tapestry. And it that doesn't
  • 01:02:41matter because, you know, since
  • 01:02:43we're ninety nine point, you
  • 01:02:44know, six percent the same
  • 01:02:45and ninety point four percent
  • 01:02:46the same,
  • 01:02:47that first reference genome doesn't
  • 01:02:49matter. But what you're and
  • 01:02:50I didn't talk about this.
  • 01:02:51But,
  • 01:02:52you know, right now people
  • 01:02:53are operating over with a
  • 01:02:54few reference genomes. These are
  • 01:02:56very high quality. But increasingly,
  • 01:02:58you're gonna hear the phrase,
  • 01:02:59Pangenome.
  • 01:03:00Because in fact, one of
  • 01:03:01the challenges that we have,
  • 01:03:02and it plays right into
  • 01:03:03the equity argument, is that
  • 01:03:05if we sequence Dave and
  • 01:03:06my genomes, there's one set
  • 01:03:08of references that'd be really
  • 01:03:09good. But if we sequence
  • 01:03:11somebody from, you know, from
  • 01:03:13Africa or somebody from South
  • 01:03:15America, if we use those
  • 01:03:16same references, we're gonna miss
  • 01:03:17things. So that causes a
  • 01:03:19discrepancy or a disparity.
  • 01:03:21So what's happening, so we've
  • 01:03:22signed called the Human Pan
  • 01:03:23Genome Program, which is heavily
  • 01:03:24supported by NHGRI,
  • 01:03:26is hundreds and hundreds of
  • 01:03:27high quality references are being
  • 01:03:29generated, and ultimately are being
  • 01:03:31amalgamated
  • 01:03:32in a computational way. So
  • 01:03:33that there will be like
  • 01:03:34a universal,
  • 01:03:36highly heterogeneous
  • 01:03:37set of reference genomes that'll
  • 01:03:38be properly matched to any
  • 01:03:40patient's genome. And it's gonna
  • 01:03:41be critical it it's a
  • 01:03:42it's a really important concept
  • 01:03:45that I just gave very
  • 01:03:45short trip to. But we
  • 01:03:47have to have properly matched
  • 01:03:48reference
  • 01:03:49genomes
  • 01:03:50to implement genomics across all
  • 01:03:52human populations. Those are being
  • 01:03:53generated. Yeah.
  • 01:03:55So, you know, we all
  • 01:03:56know that most kids in
  • 01:03:57life are really,
  • 01:03:59nature plus virtue. Right? Yes.
  • 01:04:01So so is so question
  • 01:04:02is, how are we going
  • 01:04:03to get it where we
  • 01:04:04see, hey. I have this
  • 01:04:05variant. That's associated with this
  • 01:04:07particular study. Everything will be
  • 01:04:08Icelandic,
  • 01:04:09a GWAS studies, which are
  • 01:04:11fabulous. If you're Icelandic and
  • 01:04:12live in Iceland. Yep. Right?
  • 01:04:14And so how are we
  • 01:04:15gonna get to the point
  • 01:04:16where we see, well, this
  • 01:04:17generated to be right under
  • 01:04:18these conditions with these other
  • 01:04:20background
  • 01:04:21genes, that was the issue
  • 01:04:22with this. But we don't
  • 01:04:23really have any idea whether
  • 01:04:24that variant has anything to
  • 01:04:25do with this other person
  • 01:04:26who's living in different conditions
  • 01:04:28with whatever other things. So
  • 01:04:30how do you know So
  • 01:04:31fair.
  • 01:04:31Because that makes they just
  • 01:04:33like Particularly for common genetic
  • 01:04:35disease for common diseases that
  • 01:04:36have genetic so there's a
  • 01:04:37few answers I can give
  • 01:04:38to it. First of all,
  • 01:04:39you know, I'll stress technology,
  • 01:04:41technology, technology. If we can
  • 01:04:42we just the more technologies
  • 01:04:44we could bring to bear
  • 01:04:45on this to either have
  • 01:04:46ways of measuring our physical
  • 01:04:47and social environment or to
  • 01:04:49have markers of our physical
  • 01:04:50and social environment, which is
  • 01:04:51where epigenomics can come in.
  • 01:04:53And so epigenomics sort of
  • 01:04:54gets clumped in with genomics,
  • 01:04:56but indeed, epigenomics is oftentimes
  • 01:04:58a reflection of our environment
  • 01:05:00if we can learn. So
  • 01:05:01that's one way, technology innovation.
  • 01:05:03The other way, this is
  • 01:05:04why we have these very
  • 01:05:05large population scale cohort studies.
  • 01:05:08The biggest one in the
  • 01:05:08United States is the all
  • 01:05:09of us research program in
  • 01:05:11the UK. The leading cohort
  • 01:05:12study worldwide is is, is
  • 01:05:15the UK Biobank where they
  • 01:05:16have collected massive amounts of,
  • 01:05:18of data from individuals where
  • 01:05:20they've included social, physical environment,
  • 01:05:22genomic data, epigenomic data, etcetera,
  • 01:05:24etcetera, and start to develop
  • 01:05:26correlations. It becomes a data
  • 01:05:27analysis challenge, but that's the
  • 01:05:29other way to do it.
  • 01:05:30So
  • 01:05:31sort of on those are
  • 01:05:32but but we should never
  • 01:05:33underestimate
  • 01:05:34the complexity
  • 01:05:35of physiology or pathophysiology.
  • 01:05:38But, honestly, that's a concern
  • 01:05:39for doing the the gen
  • 01:05:41sequencing team. New words, they're
  • 01:05:43just finding awful lot of
  • 01:05:44stuff where people are just
  • 01:05:45gonna get freaked out by
  • 01:05:46stuff, which is Which why
  • 01:05:48and and we probably and
  • 01:05:49which is why that we
  • 01:05:50don't want that tsunami of
  • 01:05:51fear to come in. However,
  • 01:05:54knowing which rare diseases they
  • 01:05:55may have, knowing their pharmacogenomic
  • 01:05:57profile, knowing their cancer predisposition,
  • 01:05:59We that's what we need
  • 01:06:00to study.
  • 01:06:01And we also need to
  • 01:06:02decide nobody first of all,
  • 01:06:04nobody should have to have
  • 01:06:04that done if they don't
  • 01:06:05want, and then nobody should
  • 01:06:06have to get information they
  • 01:06:07don't want. And I think
  • 01:06:09you'll have a like everything
  • 01:06:10else in life, people have
  • 01:06:11big
  • 01:06:12a a range of ideas
  • 01:06:13of what they wanna know
  • 01:06:14and when they wanna know
  • 01:06:15it. And there'll be lots
  • 01:06:16of questions about it. What
  • 01:06:17age should people learn about
  • 01:06:19this? I think once they're
  • 01:06:20adults, they should make their
  • 01:06:21own decisions, and parents will
  • 01:06:22decide for kids until then.
  • 01:06:24Yes. One more last question
  • 01:06:26since I'm
  • 01:06:27moderator.
  • 01:06:28Yeah. Sure. Yesterday, Craig Venter
  • 01:06:30died. Yes. But you didn't
  • 01:06:31mention that name in the
  • 01:06:32old history story. How do
  • 01:06:34you fit that in? So
  • 01:06:35so,
  • 01:06:36so, boy, so Craig,
  • 01:06:38for those who don't, the
  • 01:06:39young people here barely maybe
  • 01:06:41you didn't even appreciate who
  • 01:06:42Craig Van Nuys.
  • 01:06:43Craig was a brilliant scientist,
  • 01:06:45at first I would say,
  • 01:06:46and I'm very sorry that
  • 01:06:47he passed away. Brilliant scientist,
  • 01:06:49incredible innovator,
  • 01:06:52a bit of a renegade.
  • 01:06:54And what Craig did was
  • 01:06:55he was actually part of
  • 01:06:56the Human Genome Project, but
  • 01:06:58he got he he got
  • 01:06:59a little on but he
  • 01:07:00was also somebody
  • 01:07:02where he before he got
  • 01:07:03involved in the Human Genome
  • 01:07:04Project, he was the one
  • 01:07:05that invented this idea of
  • 01:07:08take a cDNA clone, get
  • 01:07:09a little bit of of
  • 01:07:10cDNA sequence from it, and
  • 01:07:12immediately try to patent it.
  • 01:07:14And so he he's always
  • 01:07:14been an entrepreneur,
  • 01:07:16and it eventually resulted in
  • 01:07:17the Supreme Court striking down
  • 01:07:19the idea that we should
  • 01:07:19be able to patent genes.
  • 01:07:21And so he's always wanting
  • 01:07:22to move faster and do
  • 01:07:23things in the best way.
  • 01:07:24So he began participating in
  • 01:07:25the Human Genome Project. And
  • 01:07:27then at a pivotal point
  • 01:07:28in the Genome Project, he
  • 01:07:29said, you're going too slow.
  • 01:07:31And so he joined a
  • 01:07:31comp or he created a
  • 01:07:32company called Celera Genomics to
  • 01:07:34compete with the Human Genome
  • 01:07:36Project and sell access to
  • 01:07:37the genomic data for subscription,
  • 01:07:40and also started to patent
  • 01:07:41genes as well. And and
  • 01:07:43so the Human Genome Project
  • 01:07:44was releasing its data for
  • 01:07:45free, and Craig was selling
  • 01:07:46a subscription to access his
  • 01:07:48DNA.
  • 01:07:48That led to,
  • 01:07:50an awkward situation
  • 01:07:52of the, you know, the
  • 01:07:53government funded and worldwide funded
  • 01:07:55effort competing with the private
  • 01:07:56sector that for the and
  • 01:07:58it's a whole other lecture
  • 01:07:59I could give, and I
  • 01:07:59do give to classes sometimes,
  • 01:08:01that led to President Clinton
  • 01:08:03getting involved and Tony Blair
  • 01:08:04getting involved to create a
  • 01:08:06circumstance where we declared it
  • 01:08:08a tie at the draft
  • 01:08:09sequence where they said, okay,
  • 01:08:11Nope. Every it's a tie.
  • 01:08:12Everybody and everybody wins. And
  • 01:08:14there was an agreement that
  • 01:08:15they would have a White
  • 01:08:16House ceremony with with with,
  • 01:08:18Bill Clinton and Francis Collins
  • 01:08:20and Craig Venter and Tony
  • 01:08:21Blair on a on a
  • 01:08:23monitor coming in from the
  • 01:08:24UK. They declared a tie.
  • 01:08:25They then published their draft
  • 01:08:27sequences in Science and Nature
  • 01:08:28about four months later. And
  • 01:08:30then Solera didn't survive. Why?
  • 01:08:32Because who would wanna pay
  • 01:08:33for something that you were
  • 01:08:34gonna get for free? And
  • 01:08:35the Genome Project produced free.
  • 01:08:36So Craig went on and
  • 01:08:37did some other incredible and
  • 01:08:39productive things, but there was
  • 01:08:41the race, and he he
  • 01:08:42made the by the way,
  • 01:08:43I'd I'd also give him
  • 01:08:44credit. If it wasn't for
  • 01:08:45him giving that that competitive,
  • 01:08:47really awkward, and at times
  • 01:08:48terrifying nudge, because he wanted
  • 01:08:50the Genome Project to shut
  • 01:08:52down and let him do
  • 01:08:52it because then he'd make
  • 01:08:53money off his subscriptions,
  • 01:08:55he made us go faster.
  • 01:08:56And, actually, congress got involved
  • 01:08:57and they doubled down and
  • 01:08:58they doubled the Genome Project's,
  • 01:09:00funding to make us go
  • 01:09:01faster. The Genome Project was
  • 01:09:03originally slated to be fifteen
  • 01:09:04years. I guess now I'm
  • 01:09:05reflecting on this. I think
  • 01:09:06it probably would have taken
  • 01:09:07fifteen years. Craig made us
  • 01:09:08go faster. We finished at
  • 01:09:09thirteen.
  • 01:09:10So any case, yeah, he
  • 01:09:11passed away yesterday. He's been
  • 01:09:12ill for quite a while.
  • 01:09:14Thanks. Thanks very much. Okay.
  • 01:09:15Thank you.